RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA493827" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 6 ✖

bioproject 1

  • PRJNA493827 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
469736 469736 PRJNA493827_P_NODE_110481_length_325_cov_1.849206_g108283_i0 PRJNA493827 110481 325 1.849206 6.0099195 Megaviridae environmental sample 1737588 Viruses Viruses 65.8 3.92e-6   NTclustered gi|1758106775|gb|MN448285.1| 1737588 g108283 i0 90 0.153846153846154 50 5 15 0 200 249 37508 37557 MAG: Megaviridae environmental sample isolate mPacV-611 clone mPacV-611_c2 blastn 50 65.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Megaviridae environmental sample
5574473 5574473 PRJNA493827_P_NODE_165605_length_266_cov_1.430052_g163407_i0 PRJNA493827 165605 266 1.430052 3.80393832 Mimivirus sp. 2742700 Viruses Viruses 161 3.87e-35   NTclustered gi|2246796486|gb|MT663335.2| 2742700 g163407 i0 84.211 8.35338345864662 171 21 63 5 3 170 877237 877404 Mimivirus sp. strain daqing, partial genome blastn 2222 161 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Mimivirus Mimivirus sp.
8758886 8758886 PRJNA493827_P_NODE_62527_length_443_cov_3.472973_g60330_i0 PRJNA493827 62527 443 3.472973 15.38527039 Mimivirus 315393 Viruses Viruses 75 9.15e-9   NTclustered gi|2574490570|gb|OQ700913.1| 212035 g60330 i0 84.932 1.50564334085779 73 11 28 0 62 134 80593 80521 Mutant Acanthamoeba polyphaga mimivirus isolate KO_qu_143, complete genome blastn 667 75 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Mimivirus Mimivirus bradfordmassiliense
13859116 13859116 PRJNA493827_P_NODE_231991_length_241_cov_0.916667_g229793_i0 PRJNA493827 231991 241 0.916667 2.20916747 Molluscipoxvirus 10278 Viruses Viruses 446 8.519999999999999e-121   NTclustered gi|2620269141|tpg|BK012005.1| 10279 g229793 i0 100 63.9377593360996 241 0 100 0 1 241 169714 169474 TPA_asm: Molluscum contagiosum virus isolate MCV1_MET1077, complete genome blastn 15409 446 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Molluscipoxvirus Molluscipoxvirus molluscum
14498681 14498681 PRJNA493827_P_NODE_121452_length_310_cov_1.527426_g119254_i0 PRJNA493827 121452 310 1.527426 4.7350206 Moumouvirus sp. 'maliensis' 2682469 Viruses Viruses 52.8 0.029   NTclustered gi|1780386545|gb|MK978772.1| 2682469 g119254 i0 100 0.0903225806451613 28 0 9 0 141 168 934741 934768 Moumouvirus maliensis, complete genome blastn 28 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Moumouvirus Moumouvirus sp. 'maliensis'
18322296 18322296 PRJNA493827_P_NODE_15435_length_1020_cov_2.165787_g13838_i0 PRJNA493827 15435 1020 2.165787 22.0910274 Rousettus bat poxvirus 3141933 Viruses Viruses 54.7 0.029   NTclustered gi|2737909140|gb|PP711852.1| 3141933 g13838 i0 100 0.0284313725490196 29 0 3 0 536 564 19655 19627 MAG: Rousettus bat poxvirus isolate 1A/Uganda/UGR70/2019 genomic sequence blastn 29 54.7 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae   Rousettus bat poxvirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;