RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA493827" and tax_clade = "Provora"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Provora · 2 ✖

bioproject 1

  • PRJNA493827 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15775286 15775286 PRJNA493827_P_NODE_3093_length_2470_cov_3.173967_g2600_i0 PRJNA493827 3093 2470 3.173967 78.3969849 Ancoracysta twista 2044563 Nebulidia other_Eukaryota 213 1.11e-49   NTclustered gi|1315028866|ref|NC_036491.1| 2044563 g2600 i0 85.93 9.27125506072874 199 28 8 0 61 259 9760 9562 Ancoracysta twista mitochondrion, complete genome blastn 22900 213 1 Eukaryota Provora   Nebulidia Nebulidea Nebulidida Nebulidae Ancoracysta Ancoracysta twista
19595513 19595513 PRJNA493827_P_NODE_107116_length_330_cov_3.579767_g104918_i0 PRJNA493827 107116 330 3.579767 11.8132311 Ancoracysta twista 2044563 Nebulidia other_Eukaryota 150 1.0699999999999999e-31   NTclustered gi|1315028866|ref|NC_036491.1| 2044563 g104918 i0 91.667 5.03636363636364 108 9 33 0 1 108 9659 9766 Ancoracysta twista mitochondrion, complete genome blastn 1662 150 1 Eukaryota Provora   Nebulidia Nebulidea Nebulidida Nebulidae Ancoracysta Ancoracysta twista

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;