RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA493827" and tax_clade = "Metamonada"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Metamonada · 6 ✖

bioproject 1

  • PRJNA493827 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
473123 473123 PRJNA493827_P_NODE_45041_length_537_cov_8.778017_g42854_i0 PRJNA493827 45041 537 8.778017 47.13795129 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 226 2.94e-54   NTclustered gi|2794957249|ref|XM_067872345.1| 2049356 g42854 i0 76.538 4.47858472998138 439 87 80 13 25 455 525 95 Monocercomonoides exilis Centrin (MONOS_2427), mRNA blastn 2405 226 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
3022114 3022114 PRJNA493827_P_NODE_18083_length_929_cov_1.154206_g16380_i0 PRJNA493827 18083 929 1.154206 10.72257374 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 58.4 0.002   NTclustered gi|2794934174|ref|XM_067874025.1| 2049356 g16380 i0 97.143 0.18729817007535 35 0 4 1 8 42 5187 5154 Monocercomonoides exilis uncharacterized protein (MONOS_3989fu3990), partial mRNA blastn 174 58.4 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
17047459 17047459 PRJNA493827_P_NODE_129514_length_300_cov_2.013216_g127316_i0 PRJNA493827 129514 300 2.013216 6.039648 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 113 1.26e-20   NTclustered gi|2794976781|ref|XM_067875255.1| 2049356 g127316 i0 83.471 2.25666666666667 121 20 40 0 39 159 6236 6356 Monocercomonoides exilis dynein haevy chain 9, inner dynein arm 5 (MONOS_5133), partial mRNA blastn 677 113 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
20872201 20872201 PRJNA493827_P_NODE_143017_length_286_cov_1.211268_g140819_i0 PRJNA493827 143017 286 1.211268 3.46422648 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 52.8 0.026   NTclustered gi|2794938159|ref|XM_067875552.1| 2049356 g140819 i0 100 0.0979020979020979 28 0 10 0 39 66 1291 1264 Monocercomonoides exilis uncharacterized protein (MONOS_5408), partial mRNA blastn 28 52.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
22147322 22147322 PRJNA493827_P_NODE_159358_length_271_cov_1.919192_g157160_i0 PRJNA493827 159358 271 1.919192 5.20101032 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 54.7 0.007   NTclustered gi|2806458868|ref|XM_068503678.1| 1144522 g157160 i0 100 0.107011070110701 29 0 11 0 243 271 4418 4446 Tritrichomonas foetus uncharacterized protein (TRFO_24311), partial mRNA blastn 29 54.7 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
24696421 24696421 PRJNA493827_P_NODE_14360_length_1065_cov_84.307460_g12821_i0 PRJNA493827 14360 1065 84.30746 897.874449 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 62.1 1.8e-4   NTclustered gi|2806442743|ref|XM_068514405.1| 1144522 g12821 i0 88.462 0.0835680751173709 52 5 5 1 129 179 890 839 Tritrichomonas foetus Digestive cysteine proteinase 1 (LCP1), partial mRNA blastn 89 62.1 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;