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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA493827" and tax_clade = "Apusozoa"

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tax_superkingdom 1

tax_clade 1

  • Apusozoa · 6 ✖

bioproject 1

  • PRJNA493827 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3024302 3024302 PRJNA493827_P_NODE_60903_length_450_cov_2.053050_g58706_i0 PRJNA493827 60903 450 2.05305 9.238725 Thecamonas trahens 529818 Root_unresolved Root_unresolved 54.7 0.012   NTclustered gi|923137136|ref|XM_013906579.1| 461836 g58706 i0 84.211 0.253333333333333 57 7 12 2 266 321 344 399 Thecamonas trahens ATCC 50062 hypothetical protein, variant (AMSG_01429), mRNA blastn 114 54.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
5574439 5574439 PRJNA493827_P_NODE_163925_length_267_cov_2.247423_g161727_i0 PRJNA493827 163925 267 2.247423 6.00061941 Thecamonas trahens 529818 Root_unresolved Root_unresolved 215 2.94e-51   NTclustered gi|923125359|ref|XM_013900694.1| 461836 g161727 i0 86 20.3033707865169 200 28 75 0 67 266 529 330 Thecamonas trahens ATCC 50062 calmodulin (AMSG_07687), mRNA blastn 5421 215 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
5574676 5574676 PRJNA493827_P_NODE_175525_length_258_cov_1.124324_g173327_i0 PRJNA493827 175525 258 1.124324 2.90075592 Thecamonas trahens 529818 Root_unresolved Root_unresolved 226 1.31e-54   NTclustered gi|923134014|ref|XM_013905019.1| 461836 g173327 i0 82.692 6.17054263565892 260 39 99 5 2 258 1761 1505 Thecamonas trahens ATCC 50062 ABC transporter E family member 2 (AMSG_03144), mRNA blastn 1592 226 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
13224254 13224254 PRJNA493827_P_NODE_144811_length_284_cov_1.478673_g142613_i0 PRJNA493827 144811 284 1.478673 4.19943132 Thecamonas trahens 529818 Root_unresolved Root_unresolved 62.1 4.36e-5   NTclustered gi|923136870|ref|XM_013906446.1| 461836 g142613 i0 85 0.211267605633803 60 9 21 0 184 243 1003 944 Thecamonas trahens ATCC 50062 cruzipain (AMSG_01293), mRNA blastn 60 62.1 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
19599730 19599730 PRJNA493827_P_NODE_74836_length_400_cov_1.498471_g72638_i0 PRJNA493827 74836 400 1.498471 5.993884 Thecamonas trahens 529818 Root_unresolved Root_unresolved 209 2.15e-49   NTclustered gi|923134252|ref|XM_013905138.1| 461836 g72638 i0 77.688 31.8575 372 63 90 15 42 400 198 562 Thecamonas trahens ATCC 50062 adenine nucleotide translocator (AMSG_02751), mRNA blastn 12743 209 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
22149774 22149774 PRJNA493827_P_NODE_52278_length_492_cov_1.214797_g50088_i0 PRJNA493827 52278 492 1.214797 5.97680124 Thecamonas trahens 529818 Root_unresolved Root_unresolved 73.1 3.69e-8   NTclustered gi|923119197|ref|XM_013897619.1| 461836 g50088 i0 88.333 0.276422764227642 60 7 12 0 397 456 574 515 Thecamonas trahens ATCC 50062 poly-zinc finger protein 1 (AMSG_11014), partial mRNA blastn 136 73.1 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;