RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA493632" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA493632 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4295795 4295795 PRJNA493632_P_NODE_726244_length_204_cov_6.877863_g722801_i0 PRJNA493632 726244 204 6.877863 14.03084052 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 134 6.1800000000000006e-27   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g722801 i0 87.395 1.11274509803922 119 11 62 3 42 159 3269051 3268936 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 227 134 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
11939268 11939268 PRJNA493632_P_NODE_260690_length_310_cov_4.046414_g257254_i0 PRJNA493632 260690 310 4.046414 12.5438834 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 171 7.66e-38   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g257254 i0 90.37 13.9774193548387 135 5 44 2 161 295 2483873 2483999 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 4333 171 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
11947448 11947448 PRJNA493632_P_NODE_720730_length_209_cov_13.698529_g717288_i0 PRJNA493632 720730 209 13.698529 28.62992561 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 318 1.64e-82   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g717288 i0 94.231 558.55023923445 208 12 99 0 1 208 5033755 5033548 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 116737 318 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
23421490 23421490 PRJNA493632_P_NODE_75659_length_509_cov_25.282110_g72295_i0 PRJNA493632 75659 509 25.28211 128.6859399 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 520 1.14e-142   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g72295 i0 85.356 98.7151277013753 519 57 100 14 1 509 5031243 5031752 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 50246 520 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;