RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA493632" and tax_phylum = "Porifera"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Porifera · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA493632 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6839430 6839430 PRJNA493632_P_NODE_326046_length_288_cov_1.776744_g322607_i0 PRJNA493632 326046 288 1.776744 5.11702272 Corticium candelabrum 121492 Porifera other_Eukaryota 52.8 0.027   NTclustered gi|2664241156|ref|XM_062660598.1| 121492 g322607 i0 100 0.0972222222222222 28 0 10 0 222 249 2675 2702 PREDICTED: Corticium candelabrum beta-mannosidase-like (LOC134191945), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Plakinidae Corticium Corticium candelabrum
11938483 11938483 PRJNA493632_P_NODE_215670_length_334_cov_5.858238_g212235_i0 PRJNA493632 215670 334 5.858238 19.56651492 Halisarca dujardinii 2583056 Porifera other_Eukaryota 113 1.42e-20   NTclustered gi|2006291129|gb|MT451960.1| 2583056 g212235 i0 84.348 12.6526946107784 115 18 34 0 218 332 1339 1225 Halisarca dujardinii tubulin alpha 1 mRNA, complete cds blastn 4226 113 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Chondrillida Halisarcidae Halisarca Halisarca dujardinii
13221430 13221430 PRJNA493632_P_NODE_656751_length_241_cov_0.916667_g653310_i0 PRJNA493632 656751 241 0.916667 2.20916747 Dysidea avara 196820 Porifera other_Eukaryota 52.8 0.022   NTclustered gi|2749581959|ref|XM_066057253.1| 196820 g653310 i0 100 0.116182572614108 28 0 12 0 84 111 1254 1227 PREDICTED: Dysidea avara eukaryotic translation initiation factor 2 subunit 2-like (LOC136262840), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Dictyoceratida Dysideidae Dysidea Dysidea avara
13222626 13222626 PRJNA493632_P_NODE_724211_length_206_cov_6.135338_g720769_i0 PRJNA493632 724211 206 6.135338 12.63879628 Amphimedon queenslandica 400682 Porifera other_Eukaryota 54.7 0.005   NTclustered gi|1133471186|ref|XM_011407450.2| 400682 g720769 i0 94.444 0.174757281553398 36 1 17 1 128 163 39 5 PREDICTED: Amphimedon queenslandica mitochondrial inner membrane protease subunit 1-like (LOC105313763), mRNA blastn 36 54.7 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Haplosclerida Niphatidae Amphimedon Amphimedon queenslandica
14495246 14495246 PRJNA493632_P_NODE_593132_length_245_cov_1.424419_g589691_i0 PRJNA493632 593132 245 1.424419 3.48982655 Halichondria panicea 6063 Porifera other_Eukaryota 165 2.72e-36   NTclustered gi|2719041159|ref|XM_064528782.1| 6063 g589691 i0 82.54 7.11836734693878 189 32 77 1 21 208 812 1000 PREDICTED: Halichondria panicea WD repeat-containing protein 5-like (LOC135333750), transcript variant X2, mRNA blastn 1744 165 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea
17042312 17042312 PRJNA493632_P_NODE_499314_length_252_cov_1.709497_g495875_i0 PRJNA493632 499314 252 1.709497 4.30793244 Dysidea avara 196820 Porifera other_Eukaryota 54.7 0.006   NTclustered gi|2749565488|ref|XM_066049461.1| 196820 g495875 i0 96.97 0.821428571428571 33 0 13 1 127 159 512 481 PREDICTED: Dysidea avara uncharacterized protein (LOC136256487), mRNA blastn 207 54.7 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Dictyoceratida Dysideidae Dysidea Dysidea avara
23415965 23415965 PRJNA493632_P_NODE_422379_length_267_cov_2.927835_g418940_i0 PRJNA493632 422379 267 2.927835 7.81731945 Sycon ciliatum 27933 Porifera other_Eukaryota 54.7 0.007   NTclustered gi|2732936996|ref|XM_065335646.1| 27933 g418940 i0 94.444 0.955056179775281 36 1 13 1 215 249 1790 1825 PREDICTED: Sycon ciliatum uncharacterized LOC135822814 (LOC135822814), transcript variant X1, mRNA blastn 255 54.7 1 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon ciliatum
23416440 23416440 PRJNA493632_P_NODE_448059_length_262_cov_2.031746_g444620_i0 PRJNA493632 448059 262 2.031746 5.32317452 Corticium candelabrum 121492 Porifera other_Eukaryota 54.7 0.007   NTclustered gi|2664361103|ref|XM_062651289.1| 121492 g444620 i0 100 0.110687022900763 29 0 11 0 56 84 1195 1223 PREDICTED: Corticium candelabrum UPF0746 protein DDB_G0281095-like (LOC134183698), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Plakinidae Corticium Corticium candelabrum

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;