RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA493632" and tax_phylum = "Nitrososphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Nitrososphaerota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA493632 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5570451 5570451 PRJNA493632_P_NODE_607585_length_244_cov_1.526316_g604144_i0 PRJNA493632 607585 244 1.526316 3.72421104 Candidatus Nitrosotenuis cloacae 1603555 Archaea Archaea 435 1.87e-117   NTclustered gi|808354332|gb|CP011097.2| 1603555 g604144 i0 98.77 1 244 3 100 0 1 244 1446928 1446685 Candidatus Nitrosotenuis cloacae strain SAT1, complete genome blastn 244 435 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosotenuis Candidatus Nitrosotenuis cloacae
6846314 6846314 PRJNA493632_P_NODE_716746_length_213_cov_14.185714_g713304_i0 PRJNA493632 716746 213 14.185714 30.21557082 Candidatus Nitrosotenuis cloacae 1603555 Archaea Archaea 388 1.26e-103   NTclustered gi|808354332|gb|CP011097.2| 1603555 g713304 i0 99.531 1 213 1 100 0 1 213 1245443 1245655 Candidatus Nitrosotenuis cloacae strain SAT1, complete genome blastn 213 388 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosotenuis Candidatus Nitrosotenuis cloacae
22142746 22142746 PRJNA493632_P_NODE_573538_length_247_cov_0.873563_g570099_i0 PRJNA493632 573538 247 0.873563 2.15770061 Candidatus Nitrosopumilus koreensis 1510466 Archaea Archaea 84.2 7.92e-12   NTclustered gi|407045174|gb|CP003842.1| 1229908 g570099 i0 96.078 59.3643724696356 51 2 21 0 157 207 1345938 1345988 Candidatus Nitrosopumilus koreensis AR1, complete genome blastn 14663 84.2 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Candidatus Nitrosopumilus koreensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;