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contig_metadata

20 rows where analysis = "blastn", bioproject = "PRJNA493632" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 20 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA493632 · 20 ✖

analysis 1

  • blastn · 20 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
463730 463730 PRJNA493632_P_NODE_426441_length_266_cov_5.015544_g423002_i0 PRJNA493632 426441 266 5.015544 13.34134704 uncultured Glomus 231055 Fungi Fungi 479 9.42e-131   NTclustered gi|1115995020|emb|LT672447.1| 231055 g423002 i0 100 97.3458646616541 259 0 97 0 7 265 313 55 Uncultured Glomus partial 18S rRNA gene, isolate B21, clone I6BWJM101AP2O5 blastn 25894 479 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae   uncultured Glomus
1739000 1739000 PRJNA493632_P_NODE_445702_length_262_cov_32.661376_g442263_i0 PRJNA493632 445702 262 32.661376 85.57280512 Mucor circinelloides 36080 Fungi Fungi 468 1.9999999999999996e-127   NTclustered gi|685431661|gb|KM014540.1| 36080 g442263 i0 99.609 97.6908396946565 256 1 98 0 1 256 47 302 Mucor circinelloides strain G1 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 25595 468 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor circinelloides
3654593 3654593 PRJNA493632_P_NODE_572083_length_247_cov_0.885057_g568644_i0 PRJNA493632 572083 247 0.885057 2.18609079 Mucoromycota 1913637 Fungi Fungi 457 4.05e-124   NTclustered gi|15429437|gb|AF378519.1| 58153 g568644 i0 100 100 247 0 100 0 1 247 354 108 Entrophospora infrequens isolate SSA13 large subunit ribosomal RNA gene, partial sequence blastn 24700 457 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Entrophosporales Entrophosporaceae Entrophospora Entrophospora infrequens
4932090 4932090 PRJNA493632_P_NODE_671544_length_237_cov_5.737805_g668103_i0 PRJNA493632 671544 237 5.737805 13.59859785 Glomeraceae 36751 Fungi Fungi 424 3.91e-114   NTclustered gi|1781342681|gb|MN794306.1| 43247 g668103 i0 100 96.6075949367089 229 0 97 0 9 237 519 291 Rhizophagus manihotis isolate UL19025 small subunit ribosomal RNA gene, partial sequence blastn 22896 424 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus manihotis
5562428 5562428 PRJNA493632_P_NODE_160125_length_376_cov_24.821782_g156701_i0 PRJNA493632 160125 376 24.821782 93.32990032 uncultured Glomus 231055 Fungi Fungi 375 1.8699999999999997e-99   NTclustered gi|583967871|gb|KF849578.1| 231055 g156701 i0 85.753 35.6382978723404 365 41 96 8 17 376 1375 1017 Uncultured Glomus clone AM98 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 13400 375 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae   uncultured Glomus
6205611 6205611 PRJNA493632_P_NODE_388125_length_274_cov_6.119403_g384686_i0 PRJNA493632 388125 274 6.119403 16.76716422 Glomeromycetes 214506 Fungi Fungi 475 1.26e-129   NTclustered gi|2565184087|gb|OR460989.1| 144539 g384686 i0 99.615 94.9124087591241 260 1 95 0 9 268 544 285 Paraglomus occultum strain 1MP-AMF small subunit ribosomal RNA gene, partial sequence blastn 26006 475 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Paraglomerales Paraglomeraceae Paraglomus Paraglomus occultum
6207530 6207530 PRJNA493632_P_NODE_719305_length_211_cov_4.681159_g715863_i0 PRJNA493632 719305 211 4.681159 9.87724549 Glomeraceae 36751 Fungi Fungi 287 4.67e-73   NTclustered gi|38348627|emb|AJ517779.1| 4876 g715863 i0 99.371 75.3554502369668 159 0 75 1 2 160 292 135 Glomus intraradices 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, clone 3.2.1 blastn 15900 287 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus intraradices
8115659 8115659 PRJNA493632_P_NODE_370227_length_278_cov_2.868293_g366788_i0 PRJNA493632 370227 278 2.868293 7.97385454 uncultured Glomerales 839843 Fungi Fungi 481 2.75e-131   NTclustered gi|2231805372|emb|LR606008.1| 839843 g366788 i0 99.62 93.2410071942446 263 1 95 0 9 271 1 263 uncultured glomerales genomic DNA sequence contains 18S rRNA gene blastn 25921 481 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae   uncultured Glomerales
10670751 10670751 PRJNA493632_P_NODE_618249_length_243_cov_6.229412_g614808_i0 PRJNA493632 618249 243 6.229412 15.13747116 Rhizophagus irregularis 588596 Fungi Fungi 54.7 0.006   NTclustered gi|2749789899|ref|XM_025329916.2| 588596 g614808 i0 100 0.349794238683128 29 0 12 0 39 67 878 850 Rhizophagus irregularis uncharacterized protein (OCT59_027812), partial mRNA blastn 85 54.7 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus irregularis
11947351 11947351 PRJNA493632_P_NODE_714990_length_215_cov_6.415493_g711548_i0 PRJNA493632 714990 215 6.415493 13.79330995 uncultured Glomerales 839843 Fungi Fungi 398 2.1099999999999997e-106   NTclustered gi|2231805343|emb|LR605994.1| 839843 g711548 i0 100 99.4046511627907 215 0 100 0 1 215 1 215 uncultured glomerales genomic DNA sequence contains 18S rRNA gene blastn 21372 398 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae   uncultured Glomerales
12582263 12582263 PRJNA493632_P_NODE_562210_length_247_cov_1.770115_g558771_i0 PRJNA493632 562210 247 1.770115 4.37218405 Mucor 4830 Fungi Fungi 446 8.759999999999998e-121   NTclustered gi|37786673|gb|AY213712.1| 4841 g558771 i0 99.19 100 247 2 100 0 1 247 589 343 Mucor racemosus strain UWFP 788 28S ribosomal RNA gene, partial sequence blastn 24700 448 0.995535714285714 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus
13214157 13214157 PRJNA493632_P_NODE_255291_length_311_cov_18.983193_g251855_i0 PRJNA493632 255291 311 18.983193 59.03773023 Rhizopus arrhizus 64495 Fungi Fungi 261 4.44e-65   NTclustered gi|1931127254|gb|MW246093.1| 64495 g251855 i0 99.31 93.6784565916399 145 0 94 1 7 150 610 466 Rhizopus arrhizus strain 6 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 29134 261 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus arrhizus
16406393 16406393 PRJNA493632_P_NODE_650533_length_241_cov_1.833333_g647092_i0 PRJNA493632 650533 241 1.833333 4.41833253 Mucoraceae 34489 Fungi Fungi 134 7.530000000000001e-27   NTclustered gi|2324057426|ref|XM_051602033.1| 29922 g647092 i0 90.196 2.15352697095436 102 10 42 0 20 121 208 107 Mucor mucedo putative ribosomal protein S28B (EV154DRAFT_513542), mRNA blastn 519 134 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor mucedo
17681972 17681972 PRJNA493632_P_NODE_725554_length_205_cov_4.795455_g722111_i0 PRJNA493632 725554 205 4.795455 9.83068275 Fungi 4751 Fungi Fungi 379 7.229999999999999e-101   NTclustered gi|2530921023|gb|OR230151.1| 27381 g722111 i0 100 99.8487804878049 205 0 100 0 1 205 1409 1613 Funneliformis mosseae isolate A.00 small subunit ribosomal RNA gene, partial sequence blastn 20469 379 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Funneliformis Funneliformis mosseae
19585138 19585138 PRJNA493632_P_NODE_180536_length_359_cov_2.136364_g177108_i0 PRJNA493632 180536 359 2.136364 7.66954676 Halteromyces radiatus 101107 Fungi Fungi 148 4.219999999999999e-31   NTclustered gi|2323707967|ref|XM_051543553.1| 101107 g177108 i0 80.928 9.4958217270195 194 32 53 5 157 347 365 174 Halteromyces radiatus ribosomal protein S27-domain-containing protein (BX664DRAFT_322744), mRNA blastn 3409 148 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Halteromyces Halteromyces radiatus
20228382 20228382 PRJNA493632_P_NODE_319336_length_289_cov_6.388889_g315897_i0 PRJNA493632 319336 289 6.388889 18.46388921 Mucorales 4827 Fungi Fungi 255 1.9e-63   NTclustered gi|655168858|gb|KJ527031.1| 4840 g315897 i0 97.959 87.3910034602076 147 3 51 0 140 286 683 537 Rhizomucor pusillus strain HT-M23-L 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 25256 257 0.992217898832685 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Rhizomucor Rhizomucor pusillus
20868738 20868738 PRJNA493632_P_NODE_618037_length_243_cov_11.900000_g614596_i0 PRJNA493632 618037 243 11.9 28.917 uncultured Archaeospora 235084 Fungi Fungi 433 6.69e-117   NTclustered gi|909630323|emb|LN618386.1| 235084 g614596 i0 99.578 97.1234567901235 237 1 98 0 1 237 78 314 Uncultured Archaeospora partial 18S rRNA gene, isolate GAxPZ VTX00004, clone GAMF3107 blastn 23601 433 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Archaeosporales Archaeosporaceae   uncultured Archaeospora
22140444 22140444 PRJNA493632_P_NODE_441678_length_263_cov_3.226316_g438239_i0 PRJNA493632 441678 263 3.226316 8.48521108 Halteromyces radiatus 101107 Fungi Fungi 235 2.22e-57   NTclustered gi|2323739097|ref|XM_051545734.1| 101107 g438239 i0 85.043 72.8821292775665 234 31 88 4 26 257 295 526 Halteromyces radiatus succinate dehydrogenase flavoprotein subunit 1 (BX664DRAFT_334592), mRNA blastn 19168 235 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Halteromyces Halteromyces radiatus
23415826 23415826 PRJNA493632_P_NODE_414419_length_269_cov_1.642857_g410980_i0 PRJNA493632 414419 269 1.642857 4.41928533 uncultured Glomus 231055 Fungi Fungi 449 7.48e-122   NTclustered gi|1600726127|gb|MK685949.1| 231055 g410980 i0 97.701 96.814126394052 261 6 97 0 8 268 315 55 Uncultured Glomus clone OTU53 small subunit ribosomal RNA gene, partial sequence blastn 26043 449 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae   uncultured Glomus
23421388 23421388 PRJNA493632_P_NODE_730899_length_200_cov_4.677165_g727456_i0 PRJNA493632 730899 200 4.677165 9.35433 Halteromyces radiatus 101107 Fungi Fungi 56.5 0.001   NTclustered gi|2323729674|ref|XM_051545092.1| 101107 g727456 i0 92.5 0.2 40 2 20 1 26 64 2596 2635 Halteromyces radiatus uncharacterized protein (BX664DRAFT_331214), mRNA blastn 40 56.5 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Halteromyces Halteromyces radiatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;