contig_metadata
8 rows where analysis = "blastn", bioproject = "PRJNA493632" and tax_phylum = "Chlamydiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 463106 | 463106 | PRJNA493632_P_NODE_392561_length_273_cov_68.235000_g389122_i0 | PRJNA493632 | 392561 | 273 | 68.235 | 186.28155 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 394 | 3.61e-105 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g389122 | i0 | 93.015 | 119.380952380952 | 272 | 15 | 99 | 3 | 5 | 273 | 2059960 | 2059690 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 32591 | 394 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 1102448 | 1102448 | PRJNA493632_P_NODE_407841_length_270_cov_2.989848_g404402_i0 | PRJNA493632 | 407841 | 270 | 2.989848 | 8.0725896 | Bacteria | 2 | Bacteria | Bacteria | 394 | 3.57e-105 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g404402 | i0 | 93.609 | 160.440740740741 | 266 | 14 | 98 | 3 | 1 | 264 | 652924 | 653188 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 43319 | 394 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 4292187 | 4292187 | PRJNA493632_P_NODE_511904_length_251_cov_0.865169_g508465_i0 | PRJNA493632 | 511904 | 251 | 0.865169 | 2.17157419 | uncultured Chlamydiae bacterium | 305355 | Bacteria | Bacteria | 311 | 3.4e-80 | NTclustered | gi|206572563|gb|FJ160741.1| | 305355 | g508465 | i0 | 89.837 | 98.4262948207171 | 246 | 19 | 97 | 6 | 9 | 251 | 2 | 244 | Uncultured Chlamydiae bacterium clone USC9 16S ribosomal RNA gene, partial sequence | blastn | 24705 | 311 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | uncultured Chlamydiae bacterium | ||||
| 9394054 | 9394054 | PRJNA493632_P_NODE_560728_length_247_cov_2.655172_g557289_i0 | PRJNA493632 | 560728 | 247 | 2.655172 | 6.55827484 | Candidatus Rubidus massiliensis | 1444712 | Bacteria | Bacteria | 440 | 4.079999999999999e-119 | NTclustered | gi|565666443|emb|HG726047.1| | 1444712 | g557289 | i0 | 98.785 | 106.275303643725 | 247 | 3 | 100 | 0 | 1 | 247 | 21 | 267 | Candidatus Rubidus massiliensis partial 16S rRNA gene, strain Rubis | blastn | 26250 | 440 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiaceae | Candidatus Rubidus | Candidatus Rubidus massiliensis | |
| 11946684 | 11946684 | PRJNA493632_P_NODE_677250_length_235_cov_5.067901_g673809_i0 | PRJNA493632 | 677250 | 235 | 5.067901 | 11.90956735 | Candidatus Rubidus massiliensis | 1444712 | Bacteria | Bacteria | 435 | 1.79e-117 | NTclustered | gi|565666443|emb|HG726047.1| | 1444712 | g673809 | i0 | 100 | 101.442553191489 | 235 | 0 | 100 | 0 | 1 | 235 | 1054 | 1288 | Candidatus Rubidus massiliensis partial 16S rRNA gene, strain Rubis | blastn | 23839 | 435 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiaceae | Candidatus Rubidus | Candidatus Rubidus massiliensis | |
| 14493533 | 14493533 | PRJNA493632_P_NODE_492232_length_253_cov_3.077778_g488793_i0 | PRJNA493632 | 492232 | 253 | 3.077778 | 7.78677834 | uncultured Chlamydiae bacterium | 305355 | Bacteria | Bacteria | 235 | 2.12e-57 | NTclustered | gi|2874254045|emb|OY970369.1| | 305355 | g488793 | i0 | 83.399 | 36.9644268774704 | 253 | 42 | 100 | 0 | 1 | 253 | 790391 | 790643 | MAG: uncultured Chlamydiae bacterium isolate MFD06092.bin.1.176 genome assembly, chromosome: 1 | blastn | 9352 | 235 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | uncultured Chlamydiae bacterium | ||||
| 17037070 | 17037070 | PRJNA493632_P_NODE_215394_length_335_cov_1.125954_g211959_i0 | PRJNA493632 | 215394 | 335 | 1.125954 | 3.7719459 | Neochlamydia hartmannellae | 112235 | Bacteria | Bacteria | 383 | 9.86e-102 | NTclustered | gi|194594624|gb|EU662269.1| | 112235 | g211959 | i0 | 87.537 | 359.041791044776 | 337 | 35 | 99 | 7 | 1 | 333 | 904 | 571 | Neochlamydia hartmannellae strain ATCC 50802 23S ribosomal RNA gene, partial sequence | blastn | 120279 | 383 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Neochlamydia | Neochlamydia hartmannellae | |
| 20864848 | 20864848 | PRJNA493632_P_NODE_398297_length_272_cov_2.819095_g394858_i0 | PRJNA493632 | 398297 | 272 | 2.819095 | 7.6679384 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 398 | 2.7799999999999997e-106 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g394858 | i0 | 93.015 | 121.183823529412 | 272 | 19 | 100 | 0 | 1 | 272 | 654248 | 654519 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 32962 | 398 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;