RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA493632" and tax_phylum = "Candidatus Melainabacteria"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA493632 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1735368 1735368 PRJNA493632_P_NODE_2542_length_1956_cov_43.412639_g1817_i0 PRJNA493632 2542 1956 43.412639 849.15121884 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 1445 0   NTclustered gi|1958007833|gb|CP064963.1| 2052166 g1817 i0 84.762 110.00408997955 1470 192 81 26 161 1612 3682686 3681231 MAG: Candidatus Melainabacteria bacterium isolate Aved_18-Q3-R54-62_BATAC.358_cln chromosome, complete genome blastn 215168 1445 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
5567627 5567627 PRJNA493632_P_NODE_448985_length_262_cov_1.603175_g445546_i0 PRJNA493632 448985 262 1.603175 4.2003185 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 320 5.94e-83   NTclustered gi|1958007833|gb|CP064963.1| 2052166 g445546 i0 88.889 87.7519083969466 261 28 99 1 2 262 3679989 3679730 MAG: Candidatus Melainabacteria bacterium isolate Aved_18-Q3-R54-62_BATAC.358_cln chromosome, complete genome blastn 22991 320 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;