RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA493244" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA493244 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8110195 8110195 PRJNA493244_P_NODE_482847_length_745_cov_20.593567_g463003_i0 PRJNA493244 482847 745 20.593567 153.42207415 Proales similis 360698 Rotifera other_Eukaryota 372 5.05e-98   NTclustered gi|1859640894|gb|MN970216.1| 360698 g463003 i0 78.83 22.5691275167785 581 102 77 19 164 734 11947 12516 Proales similis mitochondrion, complete genome blastn 16814 372 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Proalidae Proales Proales similis
8752605 8752605 PRJNA493244_P_NODE_1334087_length_287_cov_1.132743_g1310963_i0 PRJNA493244 1334087 287 1.132743 3.25097241 Metazoa 33208 Rotifera other_Eukaryota 520 6.049999999999999e-143   NTclustered gi|37785582|gb|AY210469.1| 96448 g1310963 i0 99.303 60.8327526132404 287 2 100 0 1 287 2000 2286 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 17459 525 0.990476190476191 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
9384476 9384476 PRJNA493244_P_NODE_1753148_length_170_cov_4.330275_g1730023_i0 PRJNA493244 1753148 170 4.330275 7.3614675 Adineta vaga complex sp. B JFF-2016 1813165 Rotifera other_Eukaryota 274 2.79e-69   NTclustered gi|1005055631|gb|KU860774.1| 1813165 g1730023 i0 99.338 20.9176470588235 151 1 89 0 20 170 1853 2003 Adineta vaga complex sp. B JFF-2016 isolate H158a 28S ribosomal RNA gene, partial sequence blastn 3556 274 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga complex sp. B JFF-2016

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;