RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA493244" and tax_phylum = "Rhodothermota"

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tax_superkingdom 1

tax_phylum 1

  • Rhodothermota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA493244 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13210073 13210073 PRJNA493244_P_NODE_1693511_length_204_cov_2.993007_g1670386_i0 PRJNA493244 1693511 204 2.993007 6.10573428 Rubrivirga sp. IMCC45206 3391614 Bacteria Bacteria 163 7.88e-36   NTclustered gi|2890849321|gb|CP177357.1| 3391614 g1670386 i0 84.024 10.1372549019608 169 27 83 0 23 191 3325929 3325761 Rubrivirga sp. IMCC45206 chromosome, complete genome blastn 2068 163 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rubricoccaceae Rubrivirga Rubrivirga sp. IMCC45206
20856655 20856655 PRJNA493244_P_NODE_1146897_length_348_cov_1.052265_g1123774_i0 PRJNA493244 1146897 348 1.052265 3.6618822 Rubrivirga sp. IMCC45206 3391614 Bacteria Bacteria 311 4.93e-80   NTclustered gi|2890849321|gb|CP177357.1| 3391614 g1123774 i0 82.808 2.00574712643678 349 58 100 2 1 348 2882983 2883330 Rubrivirga sp. IMCC45206 chromosome, complete genome blastn 698 311 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rubricoccaceae Rubrivirga Rubrivirga sp. IMCC45206

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;