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contig_metadata

22 rows where analysis = "blastn", bioproject = "PRJNA493244" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 22 ✖

tax_clade 1

bioproject 1

  • PRJNA493244 · 22 ✖

analysis 1

  • blastn · 22 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
455510 455510 PRJNA493244_P_NODE_136221_length_1375_cov_50.713851_g127389_i0 PRJNA493244 136221 1375 50.713851 697.31545125 Stemonitopsis subcaespitosa 1048528 Evosea other_Eukaryota 1081 0   NTclustered gi|426281760|gb|JX681133.1| 1048528 g127389 i0 88.552 80.3309090909091 891 102 65 0 265 1155 896 6 Stemonitopsis subcaespitosa actin gene, partial cds blastn 110455 1081 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Stemonitida Stemonitidae Stemonitopsis Stemonitopsis subcaespitosa
5558572 5558572 PRJNA493244_P_NODE_1152565_length_345_cov_12.676056_g1129441_i0 PRJNA493244 1152565 345 12.676056 43.7323932 Physarum polycephalum 5791 Evosea other_Eukaryota 416 9.999999999999999e-112   NTclustered gi|161207|gb|M21500.1|SLMACT35 5791 g1129441 i0 96.078 66.0579710144928 255 10 74 0 91 345 31 285 P.polycephalum actin (Ppa35) mRNA, complete cds blastn 22790 416 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
6833179 6833179 PRJNA493244_P_NODE_1388066_length_271_cov_4.876190_g1364941_i0 PRJNA493244 1388066 271 4.87619 13.2144749 Entamoeba histolytica 5759 Evosea other_Eukaryota 230 1.0699999999999995e-55   NTclustered gi|467633|emb|Z29969.1| 5759 g1364941 i0 83.871 3.92250922509225 248 33 91 7 24 269 1659 1901 E.histolytica plasmid genes for ribosomal RNA and hemolysins HLY1, HLY5mc1 HLY5mc2 HLY4 blastn 1063 230 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
6834011 6834011 PRJNA493244_P_NODE_1701666_length_203_cov_3.450704_g1678541_i0 PRJNA493244 1701666 203 3.450704 7.00492912 Phalansterium filosum 857046 Evosea other_Eukaryota 139 1.3199999999999999e-28   NTclustered gi|300078501|gb|GU001163.1| 857046 g1678541 i0 98.718 38.9507389162562 78 1 38 0 4 81 2811 2888 Phalansterium sp. EEG-2010/THA 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 7907 139 1 Eukaryota Amoebozoa   Evosea Variosea     Phalansterium Phalansterium filosum
6834386 6834386 PRJNA493244_P_NODE_262886_length_1045_cov_4.955285_g248739_i0 PRJNA493244 262886 1045 4.955285 51.78272825 Physarum polycephalum 5791 Evosea other_Eukaryota 966 0   NTclustered gi|161205|gb|L08067.1|SLMABUPA 5791 g248739 i0 87.694 0.800956937799043 837 93 79 6 160 988 14 848 Physarum polycephalum actin bundling protein, 3' end blastn 837 966 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
7477913 7477913 PRJNA493244_P_NODE_1621526_length_216_cov_1.238710_g1598401_i0 PRJNA493244 1621526 216 1.23871 2.6756136 Flamella 490353 Evosea other_Eukaryota 399 5.909999999999999e-107   NTclustered gi|163943978|gb|EU186022.1| 490515 g1598401 i0 100 101.949074074074 216 0 100 0 1 216 1706 1491 Flamella arnhemensis 18S ribosomal RNA gene, partial sequence blastn 22021 399 1 Eukaryota Amoebozoa   Evosea Variosea   Flamellidae Flamella Flamella arnhemensis
7478216 7478216 PRJNA493244_P_NODE_882506_length_462_cov_6.356608_g859578_i0 PRJNA493244 882506 462 6.356608 29.36752896 Physarum 5790 Evosea other_Eukaryota 832 0   NTclustered gi|381139256|emb|HE655073.1| 289948 g859578 i0 99.134 74.3787878787879 462 4 100 0 1 462 1403 942 Physarum albescens partial 28S rRNA gene, isolate Fr-K2 blastn 34363 832 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum albescens
8108479 8108479 PRJNA493244_P_NODE_1298327_length_297_cov_2.504237_g1275203_i0 PRJNA493244 1298327 297 2.504237 7.43758389 Didymium bahiense 289975 Evosea other_Eukaryota 459 1.39e-124   NTclustered gi|2528966063|gb|OR214927.1| 289975 g1275203 i0 98.833 84.1144781144781 257 3 87 0 41 297 1 257 Didymium bahiense voucher HFJAU14001 small subunit ribosomal RNA gene, partial sequence blastn 24982 459 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium bahiense
12578943 12578943 PRJNA493244_P_NODE_19050_length_2378_cov_8.274924_g17102_i0 PRJNA493244 19050 2378 8.274924 196.77769272 Didymium 5792 Evosea other_Eukaryota 1426 0   NTclustered gi|2687|emb|X60210.1| 5793 g17102 i0 82.249 19.4491169049622 1752 217 92 62 671 2378 1237 2938 D.iridis LSU rRNA gene blastn 46250 1430 0.997202797202797 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium iridis
13211471 13211471 PRJNA493244_P_NODE_906271_length_450_cov_7.760925_g883302_i0 PRJNA493244 906271 450 7.760925 34.9241625 uncultured Soliformovum 2510342 Evosea other_Eukaryota 555 2.7299999999999995e-153   NTclustered gi|1564356923|gb|MK443523.1| 2510342 g883302 i0 96.439 43.6311111111111 337 11 75 1 4 339 89 425 Uncultured Soliformovum clone OTUA345 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 19634 555 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae   uncultured Soliformovum
14483500 14483500 PRJNA493244_P_NODE_1084552_length_371_cov_3.777419_g1061433_i0 PRJNA493244 1084552 371 3.777419 14.01422449 Dictyostelium purpureum 5786 Evosea other_Eukaryota 56.5 0.003   NTclustered gi|330844039|ref|XM_003293898.1| 5786 g1061433 i0 96.97 0.8544474393531 33 1 9 0 231 263 2294 2326 Dictyostelium purpureum uncharacterized protein (cbfB), partial mRNA blastn 317 56.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
14485263 14485263 PRJNA493244_P_NODE_184692_length_1222_cov_7.126615_g173587_i0 PRJNA493244 184692 1222 7.126615 87.0872353 Schizoplasmodiopsis vulgaris 435421 Evosea other_Eukaryota 610 1.64e-169   NTclustered gi|159082997|gb|EF513198.1| 435421 g173587 i0 76.305 52.1276595744681 1207 248 97 29 13 1200 1224 37 Schizoplasmodiopsis vulgaris elongation factor 1A (EF1A) gene, partial cds blastn 63700 610 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida   Schizoplasmodiopsis Schizoplasmodiopsis vulgaris
18306703 18306703 PRJNA493244_P_NODE_1169355_length_339_cov_8.687050_g1146231_i0 PRJNA493244 1169355 339 8.68705 29.4490995 Entamoeba histolytica 5759 Evosea other_Eukaryota 213 1.39e-50   NTclustered gi|1865795|emb|Y11271.1| 5759 g1146231 i0 91.083 4.35988200589971 157 14 46 0 12 168 1060 904 E.histolytica ss1 gene blastn 1478 213 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
19582834 19582834 PRJNA493244_P_NODE_410196_length_825_cov_3.285340_g391783_i0 PRJNA493244 410196 825 3.28534 27.104055 Dictyostelium discoideum 44689 Evosea other_Eukaryota 54.7 0.023   NTclustered gi|66806956|ref|XM_632109.1| 352472 g391783 i0 96.875 0.0387878787878788 32 1 4 0 794 825 1048 1079 Dictyostelium discoideum AX4 hypothetical protein (DDB_G0287465) mRNA, complete cds blastn 32 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
20858863 20858863 PRJNA493244_P_NODE_546917_length_685_cov_9.121795_g526050_i0 PRJNA493244 546917 685 9.121795 62.48429575 Perichaena stipitata 2951136 Evosea other_Eukaryota 399 2.1199999999999995e-106   NTclustered gi|2250222237|gb|ON713358.1| 2951136 g526050 i0 90.032 46.3109489051095 311 27 45 4 377 685 1356 1664 Perichaena stipitata voucher MA79150 small subunit ribosomal RNA gene, partial sequence blastn 31723 399 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Trichiida Trichiidae Perichaena Perichaena stipitata
20859572 20859572 PRJNA493244_P_NODE_986637_length_413_cov_1.625000_g963561_i0 PRJNA493244 986637 413 1.625 6.71125 Soliformovum expulsum 435423 Evosea other_Eukaryota 261 6.06e-65   NTclustered gi|260909293|gb|FJ766479.1| 435423 g963561 i0 81.493 29.4261501210654 335 46 94 13 1 330 405 82 Soliformovum expulsum culture-collection ATCC:48083 clone pool B 18S ribosomal RNA gene, partial sequence blastn 12153 261 1 Eukaryota Amoebozoa   Evosea Variosea Fractovitellida Soliformoviidae Soliformovum Soliformovum expulsum
21501999 21501999 PRJNA493244_P_NODE_521717_length_708_cov_4.369397_g501230_i0 PRJNA493244 521717 708 4.369397 30.93533076 Physarum 5790 Evosea other_Eukaryota 782 0   NTclustered gi|2916681488|gb|PP948833.1| 31288 g501230 i0 98 65.0268361581921 450 9 64 0 1 450 277 726 Physarum sp. voucher HMJAU M20367-2 translation elongation factor 1-alpha (EF1A) gene, partial cds blastn 46039 789 0.991128010139417 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum sp.
22777237 22777237 PRJNA493244_P_NODE_706238_length_564_cov_9.161034_g683932_i0 PRJNA493244 706238 564 9.161034 51.66823176 Protostelium 472930 Evosea other_Eukaryota 302 5.0000000000000004e-77   NTclustered gi|262262921|gb|FJ766464.1| 472931 g683932 i0 85.424 54.2570921985816 295 37 63 5 273 564 1373 1664 Protostelium mycophagum strain KA-T15-2 small subunit ribosomal RNA gene, partial sequence blastn 30601 302 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae Protostelium Protostelium mycophagum
23407560 23407560 PRJNA493244_P_NODE_1294559_length_298_cov_3.628692_g1271435_i0 PRJNA493244 1294559 298 3.628692 10.81350216 uncultured Soliformovum 2510342 Evosea other_Eukaryota 315 3.2000000000000003e-81   NTclustered gi|1564356923|gb|MK443523.1| 2510342 g1271435 i0 90.756 1.40939597315436 238 18 79 3 64 298 107 343 Uncultured Soliformovum clone OTUA345 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 420 315 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae   uncultured Soliformovum
23407634 23407634 PRJNA493244_P_NODE_1331499_length_287_cov_3.796460_g1308375_i0 PRJNA493244 1331499 287 3.79646 10.8958402 Echinostelium minutum 300235 Evosea other_Eukaryota 359 1.4e-94   NTclustered gi|210062522|gb|AY842034.2| 300235 g1308375 i0 91.386 54.5540069686411 267 15 92 8 24 287 1127 1388 Echinostelium minutum strain ATCC 22345 18S ribosomal RNA gene, partial sequence blastn 15657 359 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Echinosteliales Echinosteliidae Echinostelium Echinostelium minutum
23408686 23408686 PRJNA493244_P_NODE_1713539_length_202_cov_1.361702_g1690414_i0 PRJNA493244 1713539 202 1.361702 2.75063804 Soliformovum irregulare 435424 Evosea other_Eukaryota 318 1.57e-82   NTclustered gi|146448863|gb|EF513199.1| 435424 g1690414 i0 95.05 92.3762376237624 202 10 100 0 1 202 963 1164 Soliformovum irregulare elongation factor 1A (EF1A) gene, partial cds blastn 18660 318 1 Eukaryota Amoebozoa   Evosea Variosea Fractovitellida Soliformoviidae Soliformovum Soliformovum irregulare
24682438 24682438 PRJNA493244_P_NODE_1737760_length_193_cov_3.545455_g1714635_i0 PRJNA493244 1737760 193 3.545455 6.84272815 Entamoeba histolytica 5759 Evosea other_Eukaryota 132 2.08e-26   NTclustered gi|467633|emb|Z29969.1| 5759 g1714635 i0 79.695 3.23316062176166 197 28 99 10 1 191 1680 1870 E.histolytica plasmid genes for ribosomal RNA and hemolysins HLY1, HLY5mc1 HLY5mc2 HLY4 blastn 624 132 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;