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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA493244" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 10 ✖

tax_clade 1

bioproject 1

  • PRJNA493244 · 10 ✖

analysis 1

  • blastn · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8752501 8752501 PRJNA493244_P_NODE_1086887_length_370_cov_4.576052_g1063766_i0 PRJNA493244 1086887 370 4.576052 16.9313924 Trypanosoma 5690 Euglenozoa other_Eukaryota 394 5.07e-105   NTclustered gi|2421781508|ref|XR_008254837.1| 5693 g1063766 i0 94.862 93.1540540540541 253 12 68 1 1 252 316 64 Trypanosoma cruzi ribosomal RNA large subunit beta, 5' partial (Tc00.1047053473001.10), partial rRNA blastn 34467 394 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
9383450 9383450 PRJNA493244_P_NODE_1375768_length_275_cov_1.644860_g1352643_i0 PRJNA493244 1375768 275 1.64486 4.523365 Bodo saltans 75058 Euglenozoa other_Eukaryota 388 1.7e-103   NTclustered gi|77994632|gb|DQ207570.1| 75058 g1352643 i0 94.141 93.0763636363636 256 13 92 2 1 254 372 117 Bodo saltans strain HFCC13 18S ribosomal RNA gene, partial sequence blastn 25596 388 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
11302955 11302955 PRJNA493244_P_NODE_1475949_length_248_cov_12.556150_g1452824_i0 PRJNA493244 1475949 248 12.55615 31.139252 Trypanosoma 5690 Euglenozoa other_Eukaryota 235 2.08e-57   NTclustered gi|2026667530|dbj|LC618030.1| 67003 g1452824 i0 89.005 69.5040322580645 191 20 77 1 1 190 5067 4877 Trypanosoma theileri YMG-11 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, ITS5, partial and complete sequence blastn 17237 235 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
13209107 13209107 PRJNA493244_P_NODE_1321151_length_290_cov_4.366812_g1298027_i0 PRJNA493244 1321151 290 4.366812 12.6637548 Leptomonas pyrrhocoris 157538 Euglenozoa other_Eukaryota 71.3 7.41e-8   NTclustered gi|1002445629|ref|XM_015803608.1| 157538 g1298027 i0 87.302 0.651724137931034 63 6 21 1 23 83 396 458 Leptomonas pyrrhocoris putative 60S ribosomal protein L17 mRNA blastn 189 71.3 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas pyrrhocoris
14484823 14484823 PRJNA493244_P_NODE_1628312_length_214_cov_2.758170_g1605187_i0 PRJNA493244 1628312 214 2.75817 5.9024838 Neobodo designis 312471 Euglenozoa other_Eukaryota 213 8.17e-51   NTclustered gi|59891957|gb|AY753617.1| 312471 g1605187 i0 100 54.7102803738318 115 0 54 0 1 115 552 666 Neobodo designis isolate Panama 18S ribosomal RNA gene, partial sequence blastn 11708 213 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
14486532 14486532 PRJNA493244_P_NODE_931372_length_438_cov_3.891247_g908368_i0 PRJNA493244 931372 438 3.891247 17.04366186 Leishmania hoogstraali 63123 Euglenozoa other_Eukaryota 137 1.14e-27   NTclustered gi|19070302|gb|AF345632.1| 63123 g908368 i0 91.346 32.7831050228311 104 3 35 5 341 438 1339 1442 Leishmania hoogstraali large subunit 24S beta ribosomal RNA gene and ribosomal intergenic spacer region, partial sequence blastn 14359 137 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania hoogstraali
15757998 15757998 PRJNA493244_P_NODE_1302753_length_296_cov_1.634043_g1279629_i0 PRJNA493244 1302753 296 1.634043 4.83676728 Parabodo caudatus 351713 Euglenozoa other_Eukaryota 490 4.909999999999998e-134   NTclustered gi|45739057|gb|AY490215.1| 351713 g1279629 i0 96.61 71.8648648648649 295 10 99 0 2 296 82 376 Bodo caudatus 18S ribosomal RNA gene, partial sequence blastn 21272 490 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Parabodonida   Parabodo Parabodo caudatus
16402276 16402276 PRJNA493244_P_NODE_1338273_length_285_cov_4.964286_g1315149_i0 PRJNA493244 1338273 285 4.964286 14.1482151 Kinetoplastea 5653 Euglenozoa other_Eukaryota 486 6.089999999999999e-133   NTclustered gi|2163362298|dbj|LC663794.1| 351713 g1315149 i0 100 92.7333333333333 263 0 92 0 1 263 1692 1430 Parabodo caudatus Flagella An0622B gene for 18S rRNA, partial sequence blastn 26429 486 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Parabodonida   Parabodo Parabodo caudatus
23406986 23406986 PRJNA493244_P_NODE_1000499_length_406_cov_37.840580_g977411_i0 PRJNA493244 1000499 406 37.84058 153.6327548 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 516 1.15e-141   NTclustered gi|2026667530|dbj|LC618030.1| 67003 g977411 i0 90.476 134.37684729064 399 26 96 9 18 406 4390 4786 Trypanosoma theileri YMG-11 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, ITS5, partial and complete sequence blastn 54557 516 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
25326143 25326143 PRJNA493244_P_NODE_1617940_length_216_cov_37.774194_g1594815_i0 PRJNA493244 1617940 216 37.774194 81.59225904 Trypanosoma 5690 Euglenozoa other_Eukaryota 265 2.25e-66   NTclustered gi|2026667531|dbj|LC618031.1| 67003 g1594815 i0 91.623 106.842592592593 191 16 88 0 24 214 4900 5090 Trypanosoma theileri OSK-16 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, partial and complete sequence blastn 23078 267 0.99250936329588 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;