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contig_metadata

13 rows where analysis = "blastn", bioproject = "PRJNA493244" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 13 ✖

tax_clade 1

bioproject 1

  • PRJNA493244 · 13 ✖

analysis 1

  • blastn · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
456042 456042 PRJNA493244_P_NODE_1580861_length_224_cov_6.889571_g1557736_i0 PRJNA493244 1580861 224 6.889571 15.43263904 Vannella sp. strain W181G/I 325084 Discosea other_Eukaryota 322 1.37e-83   NTclustered gi|62865938|gb|AY929913.1| 325084 g1557736 i0 94.787 74.3035714285714 211 3 92 6 18 223 1376 1583 Vannella sp. strain W181G/I 18S small subunit ribosomal RNA gene, partial sequence blastn 16644 322 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. strain W181G/I
456236 456236 PRJNA493244_P_NODE_1654721_length_209_cov_1.506757_g1631596_i0 PRJNA493244 1654721 209 1.506757 3.14912213 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 143 1.06e-29   NTclustered gi|470378920|ref|XM_004333477.1| 1257118 g1631596 i0 96.552 0.555023923444976 87 2 53 1 100 186 267 182 Acanthamoeba castellanii str. Neff Actobindin, putative (ACA1_256510), partial mRNA blastn 116 143 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
1730624 1730624 PRJNA493244_P_NODE_1517522_length_239_cov_1.348315_g1494397_i0 PRJNA493244 1517522 239 1.348315 3.22247285 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 364 2.4299999999999993e-96   NTclustered gi|470458449|ref|XM_004341199.1| 1257118 g1494397 i0 94.142 1 239 14 100 0 1 239 576 338 Acanthamoeba castellanii str. Neff CBS domain containing protein (ACA1_031950), partial mRNA blastn 239 364 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
4927935 4927935 PRJNA493244_P_NODE_1477104_length_248_cov_2.197861_g1453979_i0 PRJNA493244 1477104 248 2.197861 5.45069528 root 1 Root_unresolved Root_unresolved 459 1.13e-124   NTclustered gi|909719646|gb|KT185626.1| 5755 g1453979 i0 100 46.4758064516129 248 0 100 0 1 248 3689 3936 Acanthamoeba castellanii 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 11526 459 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
5560929 5560929 PRJNA493244_P_NODE_63845_length_1758_cov_8.922216_g58918_i0 PRJNA493244 63845 1758 8.922216 156.85255728 Cochliopodium larifeili 1017091 Discosea other_Eukaryota 2920 0   NTclustered gi|330902861|gb|JF298256.1| 1017091 g58918 i0 97.333 46.9453924914676 1725 34 98 7 41 1758 4 1723 Cochliopodium larifeili clone 907 18S ribosomal RNA gene, partial sequence blastn 82530 2920 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium larifeili
6832347 6832347 PRJNA493244_P_NODE_1015706_length_400_cov_2.132743_g992606_i0 PRJNA493244 1015706 400 2.132743 8.530972 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 219 3.57e-52   NTclustered gi|470475955|ref|XM_004342159.1| 1257118 g992606 i0 92.81 0.3825 153 7 37 2 1 149 277 429 Acanthamoeba castellanii str. Neff LIM domain containing protein (ACA1_114880), partial mRNA blastn 153 219 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
7478124 7478124 PRJNA493244_P_NODE_633666_length_615_cov_3.081227_g611825_i0 PRJNA493244 633666 615 3.081227 18.94954605 Cochliopodium 313557 Discosea other_Eukaryota 1079 0   NTclustered gi|399764160|gb|JQ271671.1| 313997 g611825 i0 99.661 57.3934959349593 590 2 96 0 1 590 592 3 Cochliopodium minus strain 4692S 18S ribosomal RNA gene, partial sequence blastn 35297 1079 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
10028484 10028484 PRJNA493244_P_NODE_877428_length_465_cov_2.886139_g854512_i0 PRJNA493244 877428 465 2.886139 13.42054635 Cochliopodium 313557 Discosea other_Eukaryota 850 0   NTclustered gi|659103902|gb|KJ569713.1| 313997 g854512 i0 99.572 54.3354838709677 467 0 100 2 1 465 1032 566 Cochliopodium minus clone 1101 18S ribosomal RNA gene, partial sequence blastn 25266 850 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium minus
11934570 11934570 PRJNA493244_P_NODE_1562690_length_228_cov_8.143713_g1539565_i0 PRJNA493244 1562690 228 8.143713 18.56766564 Vexillifera bacillipedes 1105345 Discosea other_Eukaryota 368 1.78e-97   NTclustered gi|399764261|gb|JQ271772.1| 1105345 g1539565 i0 97.248 8.44736842105263 218 5 96 1 1 218 278 62 Vexillifera bacillipedes strain 6HZM 18S ribosomal RNA gene, partial sequence blastn 1926 368 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera bacillipedes
13853794 13853794 PRJNA493244_P_NODE_855271_length_476_cov_10.508434_g832416_i0 PRJNA493244 855271 476 10.508434 50.02014584 Vannella 95228 Discosea other_Eukaryota 808 0   NTclustered gi|62865934|gb|AY929909.1| 325075 g832416 i0 98.475 95.1638655462185 459 5 96 2 1 458 458 1 Vannella sp. strain 4362V/II 18S small subunit ribosomal RNA gene, partial sequence blastn 45298 813 0.993849938499385 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. strain 4362V/II
18307412 18307412 PRJNA493244_P_NODE_1488795_length_245_cov_3.967391_g1465670_i0 PRJNA493244 1488795 245 3.967391 9.72010795 Vannella septentrionalis 197531 Discosea other_Eukaryota 219 2.0599999999999993e-52   NTclustered gi|300078499|gb|GU001161.1| 197531 g1465670 i0 88.649 77.3020408163265 185 14 73 5 23 200 3978 4162 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 18939 219 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
22132029 22132029 PRJNA493244_P_NODE_1389558_length_271_cov_1.828571_g1366433_i0 PRJNA493244 1389558 271 1.828571 4.95542741 Cochliopodium spiniferum 313558 Discosea other_Eukaryota 326 1.33e-84   NTclustered gi|330902897|gb|JF298273.1| 313558 g1366433 i0 92.174 86.8487084870849 230 18 85 0 20 249 866 637 Cochliopodium spiniferum clone 5102 actin gene, partial cds blastn 23536 326 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium spiniferum
23409679 23409679 PRJNA493244_P_NODE_659799_length_596_cov_3.216822_g637782_i0 PRJNA493244 659799 596 3.216822 19.17225912 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 457 1.07e-123   NTclustered gi|470522067|ref|XM_004353930.1| 1257118 g637782 i0 95.789 0.478187919463087 285 9 47 2 119 400 285 1 Acanthamoeba castellanii str. Neff uncharacterized protein (ACA1_170230), partial mRNA blastn 285 457 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;