RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA493244" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA493244 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13209066 13209066 PRJNA493244_P_NODE_1297611_length_297_cov_4.423729_g1274487_i0 PRJNA493244 1297611 297 4.423729 13.13847513 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 65.8 3.54e-6   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g1274487 i0 97.368 0.356902356902357 38 1 13 0 151 188 3893490 3893453 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 106 65.8 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
16402563 16402563 PRJNA493244_P_NODE_1737953_length_193_cov_2.909091_g1714828_i0 PRJNA493244 1737953 193 2.909091 5.61454563 Bacillati 1783272 Bacteria Bacteria 111 2.71e-20   NTclustered gi|2107717100|gb|CP070842.1| 2026733 g1714828 i0 78.736 54.2694300518135 174 31 89 5 1 172 456358 456189 MAG: Dehalococcoidales bacterium isolate bin10 chromosome blastn 10474 111 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia Dehalococcoidales     Dehalococcoidales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;