RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA493244" and tax_phylum = "Candidatus Nomuraibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Nomuraibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA493244 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5559437 5559437 PRJNA493244_P_NODE_1523105_length_237_cov_6.460227_g1499980_i0 PRJNA493244 1523105 237 6.460227 15.31073799 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 355 1.45e-93   NTclustered gi|2258875662|gb|CP060232.1| 2052152 g1499980 i0 96.296 48.2278481012658 216 8 91 0 22 237 964849 964634 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-40 chromosome, complete genome blastn 11430 355 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
23408193 23408193 PRJNA493244_P_NODE_1549219_length_231_cov_20.635294_g1526094_i0 PRJNA493244 1549219 231 20.635294 47.66752914 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 324 3.96e-84   NTclustered gi|2258875662|gb|CP060232.1| 2052152 g1526094 i0 94.712 72.987012987013 208 11 90 0 1 208 964641 964848 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-40 chromosome, complete genome blastn 16860 324 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;