RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA493244" and tax_kingdom = "Thermoproteati"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermoproteati · 4 ✖

bioproject 1

  • PRJNA493244 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3008654 3008654 PRJNA493244_P_NODE_936043_length_436_cov_2.549333_g913030_i0 PRJNA493244 936043 436 2.549333 11.11509188 Candidatus Nitrosotenuis cloacae 1603555 Archaea Archaea 758 0   NTclustered gi|808354332|gb|CP011097.2| 1603555 g913030 i0 98.598 64.3738532110092 428 6 98 0 9 436 738613 739040 Candidatus Nitrosotenuis cloacae strain SAT1, complete genome blastn 28067 758 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosotenuis Candidatus Nitrosotenuis cloacae
8108111 8108111 PRJNA493244_P_NODE_1131967_length_353_cov_2.489726_g1108845_i0 PRJNA493244 1131967 353 2.489726 8.78873278 Candidatus Nitrosotenuis cloacae 1603555 Archaea Archaea 531 3.5199999999999993e-146   NTclustered gi|808354332|gb|CP011097.2| 1603555 g1108845 i0 95.482 0.940509915014164 332 15 94 0 22 353 822864 822533 Candidatus Nitrosotenuis cloacae strain SAT1, complete genome blastn 332 531 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosotenuis Candidatus Nitrosotenuis cloacae
11935335 11935335 PRJNA493244_P_NODE_250710_length_1069_cov_3.957341_g237006_i0 PRJNA493244 250710 1069 3.957341 42.30397529 Candidatus Nitrosotenuis cloacae 1603555 Archaea Archaea 1655 0   NTclustered gi|808354332|gb|CP011097.2| 1603555 g237006 i0 95.057 1.89710009354537 1052 52 98 0 1 1052 971644 972695 Candidatus Nitrosotenuis cloacae strain SAT1, complete genome blastn 2028 1655 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosotenuis Candidatus Nitrosotenuis cloacae
22131912 22131912 PRJNA493244_P_NODE_1344518_length_284_cov_1.147982_g1321394_i0 PRJNA493244 1344518 284 1.147982 3.26026888 Candidatus Nitrosotenuis cloacae 1603555 Archaea Archaea 453 6.15e-123   NTclustered gi|808354332|gb|CP011097.2| 1603555 g1321394 i0 95.423 2 284 13 100 0 1 284 797020 796737 Candidatus Nitrosotenuis cloacae strain SAT1, complete genome blastn 568 453 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosotenuis Candidatus Nitrosotenuis cloacae

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;