RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA493244" and tax_kingdom = "Shotokuvirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Shotokuvirae · 8 ✖

bioproject 1

  • PRJNA493244 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1732056 1732056 PRJNA493244_P_NODE_626242_length_620_cov_16.633274_g604465_i0 PRJNA493244 626242 620 16.633274 103.1262988 Genomoviridae sp. 2202565 Viruses Viruses 1085 0   NTclustered gi|2756421351|gb|PP744662.1| 2202565 g604465 i0 99.169 58.0258064516129 602 5 97 0 1 602 658 1259 MAG: Genomoviridae sp. isolate 226_270563 genomic sequence blastn 35976 1085 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae   Genomoviridae sp.
3007286 3007286 PRJNA493244_P_NODE_1728763_length_199_cov_3.282609_g1705638_i0 PRJNA493244 1728763 199 3.282609 6.53239191 Alphapapillomavirus 2 337039 Viruses Viruses 311 2.58e-80   NTclustered gi|40804528|emb|AJ620211.1| 260717 g1705638 i0 98.305 7.10050251256281 177 3 89 0 23 199 2939 3115 Human papillomavirus type 94 complete genome blastn 1413 311 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 2
14483382 14483382 PRJNA493244_P_NODE_1025952_length_395_cov_8.128743_g1002848_i0 PRJNA493244 1025952 395 8.128743 32.10853485 Tetraparvovirus ungulate1 3052771 Viruses Viruses 562 1.41e-155   NTclustered gi|1372080036|gb|MG745679.1| 494651 g1002848 i0 98.137 14.3139240506329 322 6 90 0 74 395 5368 5047 Bovine hokovirus 1 isolate Guarapuava nonstructural protein 1 and capsid protein 1 genes, complete cds blastn 5654 562 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Tetraparvovirus Tetraparvovirus ungulate1
17032150 17032150 PRJNA493244_P_NODE_1071614_length_376_cov_13.990476_g1048497_i0 PRJNA493244 1071614 376 13.990476 52.60418976 Alphapapillomavirus 2 337039 Viruses Viruses 671 0   NTclustered gi|40804528|emb|AJ620211.1| 260717 g1048497 i0 99.194 7.32446808510638 372 3 99 0 1 372 6133 6504 Human papillomavirus type 94 complete genome blastn 2754 671 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 2
19581094 19581094 PRJNA493244_P_NODE_1245976_length_313_cov_13.706349_g1222852_i0 PRJNA493244 1245976 313 13.706349 42.90087237 Genomoviridae sp. 2202565 Viruses Viruses 475 1.4699999999999995e-129   NTclustered gi|2756421351|gb|PP744662.1| 2202565 g1222852 i0 98.513 37.2939297124601 269 4 86 0 23 291 1782 2050 MAG: Genomoviridae sp. isolate 226_270563 genomic sequence blastn 11673 475 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae   Genomoviridae sp.
20857146 20857146 PRJNA493244_P_NODE_1380337_length_274_cov_1.098592_g1357212_i0 PRJNA493244 1380337 274 1.098592 3.01014208 Alphapapillomavirus 2 337039 Viruses Viruses 457 4.5599999999999985e-124   NTclustered gi|40804528|emb|AJ620211.1| 260717 g1357212 i0 99.209 4.62043795620438 253 2 92 0 22 274 1945 1693 Human papillomavirus type 94 complete genome blastn 1266 457 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Alphapapillomavirus Alphapapillomavirus 2
22131338 22131338 PRJNA493244_P_NODE_1088798_length_370_cov_1.242718_g1065677_i0 PRJNA493244 1088798 370 1.242718 4.5980566 Iteradensovirus incertum2 3060057 Viruses Viruses 660 0   NTclustered gi|2500383794|ref|NC_076998.1| 1850255 g1065677 i0 98.919 1 370 3 100 1 1 370 1730 1362 Human CSF-associated densovirus putative nonstructural protein NS1 (QKT79_gp1), nonstructural protein NS2 (QKT79_gp2), nonstructural protein NS3 (QKT79_gp3), and structural protein VP (QKT79_gp4) genes, complete cds blastn 370 660 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Iteradensovirus Iteradensovirus incertum2
23410225 23410225 PRJNA493244_P_NODE_991879_length_410_cov_5.550143_g968799_i0 PRJNA493244 991879 410 5.550143 22.7555863 Betapapillomavirus 2 333924 Viruses Viruses 664 0   NTclustered gi|396924|emb|X74468.1| 10606 g968799 i0 96.97 8.27317073170732 396 10 96 2 16 410 3930 3536 Human papillomavirus type 15 genomic DNA blastn 3392 664 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Betapapillomavirus Betapapillomavirus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;