RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA493234" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA493234 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5557896 5557896 PRJNA493234_S_NODE_17265_length_257_cov_1.543478_g17172_i0 PRJNA493234 17265 257 1.543478 3.96673846 Chelidurella thaleri 2546182 Arthropoda Arthropoda 52.8 0.023   NTclustered gi|2919607036|emb|OZ238402.1| 2546182 g17172 i0 100 0.108949416342412 28 0 11 0 129 156 5916400 5916427 Chelidura thaleri genome assembly, chromosome: 3 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Dermaptera Forficulidae Chelidurella Chelidurella thaleri
19580188 19580188 PRJNA493234_S_NODE_16716_length_260_cov_2.074866_g16623_i0 PRJNA493234 16716 260 2.074866 5.3946516 Artemia franciscana 6661 Arthropoda Arthropoda 403 5.68e-108   NTclustered gi|2743058593|ref|XM_065723879.1| 6661 g16623 i0 94.615 3 260 14 100 0 1 260 402 661 PREDICTED: Artemia franciscana probable thiopurine S-methyltransferase (LOC136039898), transcript variant X1, mRNA blastn 780 403 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Anostraca Artemiidae Artemia Artemia franciscana
19580415 19580415 PRJNA493234_S_NODE_4316_length_380_cov_7.697068_g4223_i0 PRJNA493234 4316 380 7.697068 29.2488584 Diuraphis noxia 143948 Arthropoda Arthropoda 56.5 0.003   NTclustered gi|985399333|ref|XM_015511795.1| 143948 g4223 i0 100 3.63947368421053 30 0 8 0 120 149 868 839 PREDICTED: Diuraphis noxia protein grainyhead (LOC107164101), mRNA blastn 1383 56.5 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Hemiptera Aphididae Diuraphis Diuraphis noxia
22131129 22131129 PRJNA493234_S_NODE_818_length_580_cov_48.305720_g726_i0 PRJNA493234 818 580 48.30572 280.173176 Timema californicum 61474 Arthropoda Arthropoda 56.5 0.004   NTclustered gi|1965181363|emb|OE475415.1| 61474 g726 i0 90.909 0.0758620689655172 44 1 7 2 336 376 266 309 2_Tcm_b3v08 blastn 44 56.5 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Phasmatodea Timematidae Timema Timema californicum
23406971 23406971 PRJNA493234_S_NODE_9499_length_315_cov_2.995868_g9406_i0 PRJNA493234 9499 315 2.995868 9.4369842 Medioppia subpectinata 1979941 Arthropoda Arthropoda 54.7 0.008   NTclustered gi|1963617327|emb|OC873114.1| 1979941 g9406 i0 100 0.0920634920634921 29 0 9 0 83 111 1638 1610 Medioppia subpectinata blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Sarcoptiformes Oppiidae Medioppia Medioppia subpectinata
24680499 24680499 PRJNA493234_S_NODE_4420_length_378_cov_3.593443_g4327_i0 PRJNA493234 4420 378 3.593443 13.58321454 Timema cristinae 61476 Arthropoda Arthropoda 52.8 0.036   NTclustered gi|1947374153|emb|OC367119.1| 61476 g4327 i0 96.875 0.0846560846560847 32 0 8 1 144 174 131 100 3_Tce_b3v08 blastn 32 52.8 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Phasmatodea Timematidae Timema Timema cristinae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;