contig_metadata
5 rows where analysis = "blastn", bioproject = "PRJNA493234" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2375019 | 2375019 | PRJNA493234_S_NODE_10062_length_310_cov_3.594937_g9969_i0 | PRJNA493234 | 10062 | 310 | 3.594937 | 11.1443047 | Dermacoccus | 57495 | Bacteria | Bacteria | 573 | 4.999999999999998e-159 | NTclustered | gi|1730271953|gb|CP043031.1| | 322596 | g9969 | i0 | 100 | 243.987096774194 | 310 | 0 | 100 | 0 | 1 | 310 | 2215794 | 2215485 | Dermacoccus abyssi strain HZAU 226 chromosome, complete genome | blastn | 75636 | 573 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Dermacoccaceae | Dermacoccus | Dermacoccus abyssi | ||
| 3650682 | 3650682 | PRJNA493234_S_NODE_3683_length_395_cov_5.369565_g3590_i0 | PRJNA493234 | 3683 | 395 | 5.369565 | 21.20978175 | Cutibacterium | 1912216 | Bacteria | Bacteria | 725 | 0 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g3590 | i0 | 99.747 | 266.506329113924 | 395 | 1 | 100 | 0 | 1 | 395 | 55458 | 55852 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 105270 | 725 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 15756916 | 15756916 | PRJNA493234_S_NODE_15773_length_266_cov_3.580311_g15680_i0 | PRJNA493234 | 15773 | 266 | 3.580311 | 9.52362726 | Lawsonella clevelandensis | 1528099 | Bacteria | Bacteria | 459 | 1.2299999999999998e-124 | NTclustered | gi|1723592958|emb|LR584267.1| | 1528099 | g15680 | i0 | 97.744 | 145.830827067669 | 266 | 6 | 100 | 0 | 1 | 266 | 553490 | 553225 | Lawsonella clevelandensis isolate USB-603019 genome assembly, chromosome: 1 | blastn | 38791 | 459 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Lawsonellaceae | Lawsonella | Lawsonella clevelandensis | ||
| 18951075 | 18951075 | PRJNA493234_S_NODE_3055_length_412_cov_8.516224_g2962_i0 | PRJNA493234 | 3055 | 412 | 8.516224 | 35.08684288 | Corynebacterium | 1716 | Bacteria | Bacteria | 756 | 0 | NTclustered | gi|2531251647|gb|CP046606.1| | 144183 | g2962 | i0 | 99.757 | 380.211165048544 | 412 | 1 | 100 | 0 | 1 | 412 | 649072 | 649483 | Corynebacterium afermentans subsp. afermentans strain DSM 44280 chromosome, complete genome | blastn | 156647 | 756 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium afermentans | ||
| 24680271 | 24680271 | PRJNA493234_S_NODE_16000_length_265_cov_1.213542_g15907_i0 | PRJNA493234 | 16000 | 265 | 1.213542 | 3.2158863 | Actinomyces viscosus | 1656 | Bacteria | Bacteria | 451 | 2.04e-122 | NTclustered | gi|168485113|gb|EU306593.1| | 1656 | g15907 | i0 | 97.368 | 219.720754716981 | 266 | 5 | 100 | 2 | 1 | 265 | 565 | 829 | Actinomyces viscosus 16S-23S ribosomal RNA intergenic spacer, partial sequence | blastn | 58226 | 451 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Actinomycetales | Actinomycetaceae | Actinomyces | Actinomyces viscosus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;