RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA492406" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA492406 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5556176 5556176 PRJNA492406_P_NODE_28945_length_247_cov_0.885057_g28646_i0 PRJNA492406 28945 247 0.885057 2.18609079 Asplanchna sp. 3231738 Rotifera other_Eukaryota 148 2.77e-31   NTclustered gi|2778092479|gb|PP988071.1| 3231738 g28646 i0 77.823 6.57894736842105 248 49 99 5 1 245 5883 6127 Asplanchna sp. chromosome I mitochondrion, complete sequence blastn 1625 148 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Asplanchnidae Asplanchna Asplanchna sp.
9380062 9380062 PRJNA492406_P_NODE_10488_length_381_cov_1.240260_g10189_i0 PRJNA492406 10488 381 1.24026 4.7253906 Brachionus angularis 396692 Rotifera other_Eukaryota 82.4 4.63e-11   NTclustered gi|1999716433|gb|MT875425.1| 396692 g10189 i0 76.543 8.84514435695538 162 31 42 7 221 380 6208 6364 Brachionus angularis chromosome I mitochondrion, complete sequence blastn 3370 82.4 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus angularis
23404858 23404858 PRJNA492406_P_NODE_25459_length_256_cov_1.622951_g25160_i0 PRJNA492406 25459 256 1.622951 4.15475456 Lepadella patella 231622 Rotifera other_Eukaryota 350 7.37e-92   NTclustered gi|83285192|gb|DQ297739.1| 231622 g25160 i0 91.44 1.00390625 257 18 99 4 1 254 376 631 Lepadella patella 28S ribosomal RNA gene, partial sequence blastn 257 350 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lepadellidae Lepadella Lepadella patella

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;