RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA492406" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA492406 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6829969 6829969 PRJNA492406_P_NODE_19326_length_286_cov_9.605634_g19027_i0 PRJNA492406 19326 286 9.605634 27.47211324 Monotoplana cf. diorchis 104924 Platyhelminthes Platyhelminthes 73.1 2.03e-8   NTclustered gi|10944981|emb|AJ270174.1| 104924 g19027 i0 100 17.8251748251748 39 0 14 0 92 130 1633 1595 Monotoplana cf. diorchis partial 28S rRNA gene blastn 5098 73.1 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Proseriata Monotoplanidae Monotoplana Monotoplana cf. diorchis
10656571 10656571 PRJNA492406_P_NODE_8989_length_408_cov_1.214925_g8690_i0 PRJNA492406 8989 408 1.214925 4.956894 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 359 2.06e-94   NTclustered gi|68479954|gb|DQ076149.1| 6182 g8690 i0 97.608 0.781862745098039 209 5 78 0 200 408 136 344 Schistosoma japonicum clone 1XA1 unknown mRNA blastn 319 359 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;