contig_metadata
14 rows where analysis = "blastn", bioproject = "PRJNA492406" and tax_phylum = "Oomycota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 452873 | 452873 | PRJNA492406_P_NODE_7481_length_443_cov_1.745946_g7182_i0 | PRJNA492406 | 7481 | 443 | 1.745946 | 7.73454078 | Saprolegnia diclina | 112098 | SAR_Eukaryotes | SAR_Eukaryotes | 174 | 8.77e-39 | NTclustered | gi|669159439|ref|XM_008617060.1| | 1156394 | g7182 | i0 | 77.895 | 31.7584650112867 | 285 | 59 | 64 | 4 | 54 | 336 | 451 | 169 | Saprolegnia diclina VS20 60S ribosomal protein mRNA | blastn | 14069 | 174 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Saprolegniaceae | Saprolegnia | Saprolegnia diclina | ||
| 8752260 | 8752260 | PRJNA492406_P_NODE_9687_length_394_cov_6.704050_g9388_i0 | PRJNA492406 | 9687 | 394 | 6.70405 | 26.413957 | Peronosporomycetes | 3418804 | SAR_Eukaryotes | SAR_Eukaryotes | 702 | 0 | NTclustered | gi|440919553|gb|JX436353.1| | 1279233 | g9388 | i0 | 98.98 | 98.1218274111675 | 392 | 4 | 99 | 0 | 1 | 392 | 381 | 772 | Myzocytiopsis sp. GPR-2013 28S ribosomal RNA gene, partial sequence | blastn | 38660 | 702 | 1 | Eukaryota | Sar | Oomycota | Myzocytiopsidales | Myzocytiopsidaceae | Myzocytiopsis | Myzocytiopsis sp. GPR-2013 | |||
| 10656406 | 10656406 | PRJNA492406_P_NODE_32129_length_241_cov_0.916667_g31830_i0 | PRJNA492406 | 32129 | 241 | 0.916667 | 2.20916747 | Phytophthora infestans | 4787 | SAR_Eukaryotes | SAR_Eukaryotes | 302 | 1.95e-77 | NTclustered | gi|301107178|ref|XM_002902626.1| | 403677 | g31830 | i0 | 89.256 | 88.9045643153527 | 242 | 24 | 100 | 2 | 1 | 241 | 209 | 449 | Phytophthora infestans T30-4 40S ribosomal protein S2 (PITG_10146), mRNA | blastn | 21426 | 302 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora infestans | ||
| 11930811 | 11930811 | PRJNA492406_P_NODE_10630_length_379_cov_1.006536_g10331_i0 | PRJNA492406 | 10630 | 379 | 1.006536 | 3.81477144 | Albugo laibachii | 653948 | SAR_Eukaryotes | SAR_Eukaryotes | 193 | 2.04e-44 | NTclustered | gi|325195237|emb|FR826032.1| | 890382 | g10331 | i0 | 82.456 | 39.4934036939314 | 228 | 33 | 59 | 3 | 1 | 224 | 431 | 207 | Albugo laibachii Nc14, genomic contig CONTIG_3119_NC14_v4_456_35141 | blastn | 14968 | 193 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Albuginales | Albuginaceae | Albugo | Albugo laibachii | ||
| 11930904 | 11930904 | PRJNA492406_P_NODE_14170_length_333_cov_1.184615_g13871_i0 | PRJNA492406 | 14170 | 333 | 1.184615 | 3.94476795 | Aphanomyces invadans | 157072 | SAR_Eukaryotes | SAR_Eukaryotes | 132 | 3.92e-26 | NTclustered | gi|673039884|ref|XM_008875681.1| | 157072 | g13871 | i0 | 81.707 | 1.33633633633634 | 164 | 25 | 49 | 5 | 171 | 332 | 459 | 299 | Aphanomyces invadans 60S ribosomal protein mRNA | blastn | 445 | 132 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces invadans | ||
| 11931129 | 11931129 | PRJNA492406_P_NODE_23990_length_263_cov_2.010526_g23691_i0 | PRJNA492406 | 23990 | 263 | 2.010526 | 5.28768338 | Phytophthora litchii | 100870 | SAR_Eukaryotes | SAR_Eukaryotes | 425 | 1.2299999999999999e-114 | NTclustered | gi|2248512916|ref|NC_063792.1| | 100870 | g23691 | i0 | 95.833 | 99.9961977186312 | 264 | 10 | 100 | 1 | 1 | 263 | 6047 | 6310 | Phytophthora litchii isolate SHS3 mitochondrion, complete genome | blastn | 26299 | 425 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora litchii | ||
| 13206122 | 13206122 | PRJNA492406_P_NODE_17951_length_294_cov_1.737557_g17652_i0 | PRJNA492406 | 17951 | 294 | 1.737557 | 5.10841758 | Lagenidium sp. | 2358452 | SAR_Eukaryotes | SAR_Eukaryotes | 475 | 1.3699999999999999e-129 | NTclustered | gi|1923460301|gb|MW187669.1| | 2358452 | g17652 | i0 | 95.932 | 101.404761904762 | 295 | 8 | 100 | 4 | 1 | 294 | 346 | 55 | Lagenidium sp. isolate CCRJB_35 small subunit ribosomal RNA gene, partial sequence; mitochondrial | blastn | 29813 | 475 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Lagenidium | Lagenidium sp. | ||
| 14481442 | 14481442 | PRJNA492406_P_NODE_7712_length_436_cov_12.730028_g7413_i0 | PRJNA492406 | 7712 | 436 | 12.730028 | 55.50292208 | Pythium monospermum | 92964 | SAR_Eukaryotes | SAR_Eukaryotes | 769 | 0 | NTclustered | gi|33520250|gb|AY273995.1| | 92964 | g7413 | i0 | 98.618 | 99.2775229357798 | 434 | 6 | 99 | 0 | 1 | 434 | 467 | 34 | Pythium monospermum large subunit ribosomal RNA gene, partial sequence | blastn | 43285 | 769 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Pythium | Pythium monospermum | ||
| 16401939 | 16401939 | PRJNA492406_P_NODE_9753_length_393_cov_3.375000_g9454_i0 | PRJNA492406 | 9753 | 393 | 3.375 | 13.26375 | Pythiaceae | 4782 | SAR_Eukaryotes | SAR_Eukaryotes | 664 | 0 | NTclustered | gi|937408816|ref|NC_027966.1| | 114742 | g9454 | i0 | 97.201 | 103.918575063613 | 393 | 10 | 100 | 1 | 1 | 393 | 10824 | 11215 | Pythium insidiosum mitochondrial DNA, complete genome | blastn | 40840 | 664 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Pythium | Pythium insidiosum | ||
| 17676909 | 17676909 | PRJNA492406_P_NODE_24854_length_259_cov_1.655914_g24555_i0 | PRJNA492406 | 24854 | 259 | 1.655914 | 4.28881726 | Phytophthora | 4783 | SAR_Eukaryotes | SAR_Eukaryotes | 342 | 1.25e-89 | NTclustered | gi|2651589115|gb|PP108238.1| | 4785 | g24555 | i0 | 90.421 | 103.200772200772 | 261 | 23 | 100 | 2 | 1 | 259 | 23610 | 23350 | Phytophthora cinnamomi strain CT09CHAP1 mitochondrion, complete genome | blastn | 26729 | 342 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora cinnamomi | ||
| 18304044 | 18304044 | PRJNA492406_P_NODE_19575_length_285_cov_2.165094_g19276_i0 | PRJNA492406 | 19575 | 285 | 2.165094 | 6.1705179 | Saprolegnia parasitica | 101203 | SAR_Eukaryotes | SAR_Eukaryotes | 139 | 1.96e-28 | NTclustered | gi|813163222|ref|XM_012347282.1| | 695850 | g19276 | i0 | 79.048 | 19.7719298245614 | 210 | 38 | 73 | 6 | 71 | 277 | 323 | 117 | Saprolegnia parasitica CBS 223.65 translation initiation factor eIF-5A mRNA | blastn | 5635 | 139 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Saprolegniaceae | Saprolegnia | Saprolegnia parasitica | ||
| 19578038 | 19578038 | PRJNA492406_P_NODE_10796_length_376_cov_1.722772_g10497_i0 | PRJNA492406 | 10796 | 376 | 1.722772 | 6.47762272 | Aphanomyces euteiches | 100861 | SAR_Eukaryotes | SAR_Eukaryotes | 298 | 4.16e-76 | NTclustered | gi|166040594|emb|CU350614.1| | 100861 | g10497 | i0 | 84.488 | 78.5398936170213 | 303 | 45 | 80 | 2 | 75 | 376 | 786 | 485 | Aphanomyces euteiches cDNA | blastn | 29531 | 298 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces euteiches | ||
| 19578409 | 19578409 | PRJNA492406_P_NODE_26256_length_252_cov_1.391061_g25957_i0 | PRJNA492406 | 26256 | 252 | 1.391061 | 3.50547372 | Phytophthora cinnamomi | 4785 | SAR_Eukaryotes | SAR_Eukaryotes | 150 | 7.879999999999999e-32 | NTclustered | gi|2795050694|ref|XM_067937128.1| | 4785 | g25957 | i0 | 84.076 | 6.42063492063492 | 157 | 23 | 62 | 2 | 97 | 252 | 759 | 914 | Phytophthora cinnamomi AMP deaminase (IUM83_12500), partial mRNA | blastn | 1618 | 150 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora cinnamomi | ||
| 22776289 | 22776289 | PRJNA492406_P_NODE_21198_length_278_cov_1.117073_g20899_i0 | PRJNA492406 | 21198 | 278 | 1.117073 | 3.10546294 | Saprolegnia | 4769 | SAR_Eukaryotes | SAR_Eukaryotes | 211 | 3.9900000000000002e-50 | NTclustered | gi|813135721|ref|XM_012343195.1| | 695850 | g20899 | i0 | 81.641 | 4.64028776978417 | 256 | 45 | 92 | 2 | 24 | 278 | 922 | 668 | Saprolegnia parasitica CBS 223.65 T-complex protein 1 subunit beta mRNA | blastn | 1290 | 211 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Saprolegniaceae | Saprolegnia | Saprolegnia parasitica |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;