RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA492406" and tax_phylum = "Mollusca"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA492406 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8105749 8105749 PRJNA492406_P_NODE_28587_length_247_cov_1.356322_g28288_i0 PRJNA492406 28587 247 1.356322 3.35011534 Argopecten irradians 31199 Mollusca Mollusca 457 4.05e-124   NTclustered gi|2835323525|ref|XM_069253663.1| 31199 g28288 i0 100 2 247 0 100 0 1 247 262 508 PREDICTED: Argopecten irradians arginine kinase-like (LOC138312962), mRNA blastn 494 457 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Argopecten Argopecten irradians
9380426 9380426 PRJNA492406_P_NODE_26768_length_251_cov_0.865169_g26469_i0 PRJNA492406 26768 251 0.865169 2.17157419 Gigantopelta aegis 1735272 Mollusca Mollusca 154 6.06e-33   NTclustered gi|2034304185|ref|XM_041493351.1| 1735272 g26469 i0 81.347 79.7848605577689 193 33 76 3 60 251 3413 3223 PREDICTED: Gigantopelta aegis pre-mRNA-processing-splicing factor 8 (LOC121368612), mRNA blastn 20026 154 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Neomphalida Peltospiridae Gigantopelta Gigantopelta aegis
11931254 11931254 PRJNA492406_P_NODE_30450_length_244_cov_0.900585_g30151_i0 PRJNA492406 30450 244 0.900585 2.1974274 Argopecten irradians 31199 Mollusca Mollusca 451 1.86e-122   NTclustered gi|2835403944|ref|XM_069277307.1| 31199 g30151 i0 100 1 244 0 100 0 1 244 5481 5238 PREDICTED: Argopecten irradians AP-2 complex subunit alpha-2-like (LOC138329989), mRNA blastn 244 451 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Argopecten Argopecten irradians
15755046 15755046 PRJNA492406_P_NODE_20073_length_283_cov_1.385714_g19774_i0 PRJNA492406 20073 283 1.385714 3.92157062 Argopecten irradians 31199 Mollusca Mollusca 523 4.5999999999999983e-144   NTclustered gi|2835382781|ref|XM_069266006.1| 31199 g19774 i0 100 24.6183745583039 283 0 100 0 1 283 391 109 PREDICTED: Argopecten irradians small ribosomal subunit protein uS13 (LOC138321958), mRNA blastn 6967 523 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Argopecten Argopecten irradians
17029702 17029702 PRJNA492406_P_NODE_19714_length_285_cov_1.132075_g19415_i0 PRJNA492406 19714 285 1.132075 3.22641375 Argopecten irradians 31199 Mollusca Mollusca 527 3.59e-145   NTclustered gi|2835381844|ref|XM_069265495.1| 31199 g19415 i0 100 1 285 0 100 0 1 285 1880 2164 PREDICTED: Argopecten irradians fibril-forming collagen alpha chain-like (LOC138321663), mRNA blastn 285 527 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Argopecten Argopecten irradians
25325407 25325407 PRJNA492406_P_NODE_18620_length_289_cov_3.962963_g18321_i0 PRJNA492406 18620 289 3.962963 11.45296307 Argopecten 31198 Mollusca Mollusca 534 2.18e-147   NTclustered gi|2835321405|ref|XR_011206645.1| 31199 g18321 i0 100 100.242214532872 289 0 100 0 1 289 739 451 PREDICTED: Argopecten irradians large subunit ribosomal RNA (LOC138311412), rRNA blastn 28970 534 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Argopecten Argopecten irradians

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;