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contig_metadata

23 rows where analysis = "blastn", bioproject = "PRJNA492406" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 23 ✖

tax_clade 1

bioproject 1

  • PRJNA492406 · 23 ✖

analysis 1

  • blastn · 23 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1727162 1727162 PRJNA492406_P_NODE_18862_length_288_cov_2.586047_g18563_i0 PRJNA492406 18862 288 2.586047 7.44781536 Cochliopodium larifeili 1017091 Discosea other_Eukaryota 438 1.7499999999999995e-118   NTclustered gi|330902858|gb|JF298255.1| 1017091 g18563 i0 94.138 11.5694444444444 290 13 100 4 1 288 636 923 Cochliopodium larifeili clone 904 18S ribosomal RNA gene, partial sequence blastn 3332 438 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium larifeili
2374669 2374669 PRJNA492406_P_NODE_10442_length_381_cov_15.480519_g10143_i0 PRJNA492406 10442 381 15.480519 58.98077739 Ripella 1217112 Discosea other_Eukaryota 571 2.26e-158   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g10143 i0 94.226 98.7112860892388 381 11 100 4 1 381 607 976 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 37609 571 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
3003159 3003159 PRJNA492406_P_NODE_21023_length_278_cov_3.151220_g20724_i0 PRJNA492406 21023 278 3.15122 8.7603916 Acanthamoeba comandoni 65659 Discosea other_Eukaryota 86.1 2.52e-12   NTclustered gi|28194600|gb|AF479544.1| 65659 g20724 i0 76.344 1.65467625899281 186 29 67 11 94 278 1011 1182 Acanthamoeba comandoni strain ATCC 30135 16S small subunit ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product blastn 460 86.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba comandoni
4279759 4279759 PRJNA492406_P_NODE_3424_length_648_cov_3.975652_g3134_i0 PRJNA492406 3424 648 3.975652 25.76222496 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 374 1.21e-98   NTclustered gi|470441552|ref|XM_004339378.1| 1257118 g3134 i0 79.235 71.2577160493827 549 104 84 8 3 546 1 544 Acanthamoeba castellanii str. Neff ribosomal protein L10, putative (ACA1_061530), partial mRNA blastn 46175 374 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
4279843 4279843 PRJNA492406_P_NODE_6544_length_470_cov_3.105793_g6245_i0 PRJNA492406 6544 470 3.105793 14.5972271 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 237 1.18e-57   NTclustered gi|470529917|ref|XM_004368096.1| 1257118 g6245 i0 80.795 64.1234042553191 302 58 64 0 89 390 121 422 Acanthamoeba castellanii str. Neff ribosomal protein S17, putative (ACA1_292890), partial mRNA blastn 30138 237 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
4927378 4927378 PRJNA492406_P_NODE_22624_length_270_cov_2.091371_g22325_i0 PRJNA492406 22624 270 2.091371 5.6467017 Acanthamoeba 5754 Discosea other_Eukaryota 152 2.3699999999999998e-32   NTclustered gi|5585|emb|Y00624.1| 5755 g22325 i0 79.535 1.88888888888889 215 42 79 2 1 214 2044 1831 Acanthamoeba castellanii nonmuscle myosin heavy chain gene blastn 510 152 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
5555902 5555902 PRJNA492406_P_NODE_15585_length_317_cov_44.618852_g15286_i0 PRJNA492406 15585 317 44.618852 141.44176084 Vannella septentrionalis 197531 Discosea other_Eukaryota 575 1.4299999999999996e-159   NTclustered gi|300078499|gb|GU001161.1| 197531 g15286 i0 99.369 53.0536277602524 317 2 100 0 1 317 4026 4342 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 16818 575 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
7477353 7477353 PRJNA492406_P_NODE_9426_length_399_cov_33.521472_g9127_i0 PRJNA492406 9426 399 33.521472 133.75067328 Cochliopodium 313557 Discosea other_Eukaryota 505 2.44e-138   NTclustered gi|59876024|gb|AY785057.1| 313998 g9127 i0 89.487 43.2882205513784 409 30 100 12 1 399 450 45 Cochliopodium sp. strain Kiel 18S ribosomal RNA gene, partial sequence blastn 17272 505 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium sp. strain Kiel
8752090 8752090 PRJNA492406_P_NODE_11467_length_366_cov_5.600683_g11168_i0 PRJNA492406 11467 366 5.600683 20.49849978 Vannella 95228 Discosea other_Eukaryota 643 4.5099999999999985e-180   NTclustered gi|270381377|emb|FN598227.1| 544561 g11168 i0 98.361 94.4043715846994 366 6 100 0 1 366 688 1053 Uncultured Vannellidae partial 18S rRNA gene, clone BIO1_A11 blastn 34552 643 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae   uncultured Vannellidae
11302379 11302379 PRJNA492406_P_NODE_18889_length_288_cov_2.018605_g18590_i0 PRJNA492406 18889 288 2.018605 5.8135824 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 207 5.37e-49   NTclustered gi|927486|emb|X79205.1| 5755 g18590 i0 86.387 51.1736111111111 191 24 66 2 1 190 824 1013 A.castellanii mRNA for methionine adenosyltransferase blastn 14738 207 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
11931309 11931309 PRJNA492406_P_NODE_3310_length_660_cov_1.754685_g3020_i0 PRJNA492406 3310 660 1.754685 11.580921 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 505 4.2e-138   NTclustered gi|470484553|ref|XM_004344028.1| 1257118 g3020 i0 80.67 53.4863636363636 657 121 99 6 7 660 972 319 Acanthamoeba castellanii str. Neff Sadenosyl-L-homocysteine hydrolase, putative (ACA1_054200), partial mRNA blastn 35301 505 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
13206500 13206500 PRJNA492406_P_NODE_5831_length_496_cov_87.283688_g5532_i0 PRJNA492406 5831 496 87.283688 432.92709248 Cochliopodium kieliense 1512276 Discosea other_Eukaryota 785 0   NTclustered gi|659103926|gb|KJ569726.1| 1512276 g5532 i0 96.646 62.8870967741936 477 9 95 7 1 471 479 4 Cochliopodium kieliense clone 9605 18S ribosomal RNA gene, partial sequence blastn 31192 785 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium kieliense
14480926 14480926 PRJNA492406_P_NODE_14632_length_327_cov_1.791339_g14333_i0 PRJNA492406 14632 327 1.791339 5.85767853 Vexillifera bacillipedes 1105345 Discosea other_Eukaryota 566 8.879999999999998e-157   NTclustered gi|354720325|gb|HQ687484.1| 1105345 g14333 i0 98.16 26.4311926605505 326 2 99 2 2 327 427 106 Vexillifera bacillipedes strain TIL2 small subunit ribosomal RNA gene, partial sequence blastn 8643 566 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera bacillipedes
15127367 15127367 PRJNA492406_P_NODE_8052_length_428_cov_19.492958_g7753_i0 PRJNA492406 8052 428 19.492958 83.42986024 Vannellidae 95227 Discosea other_Eukaryota 621 2.51e-173   NTclustered gi|62865939|gb|AY929914.1| 325077 g7753 i0 94.39 94.0070093457944 410 14 95 6 22 428 1229 1632 Vannella sp. strain CAZ6/I 18S small subunit ribosomal RNA gene, partial sequence blastn 40235 627 0.990430622009569 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. strain CAZ6/I
15754806 15754806 PRJNA492406_P_NODE_10153_length_386_cov_19.373802_g9854_i0 PRJNA492406 10153 386 19.373802 74.78287572 Vannella septentrionalis 197531 Discosea other_Eukaryota 658 0   NTclustered gi|300078499|gb|GU001161.1| 197531 g9854 i0 97.409 1 386 10 100 0 1 386 1242 1627 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 386 658 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
15755383 15755383 PRJNA492406_P_NODE_5353_length_517_cov_68.461712_g5057_i0 PRJNA492406 5353 517 68.461712 353.94705104 Ripella sp. 805 1217113 Discosea other_Eukaryota 813 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g5057 i0 95.183 101.104448742747 519 17 100 6 1 517 527 15 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 52271 813 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
17676970 17676970 PRJNA492406_P_NODE_32894_length_226_cov_2.163399_g32595_i0 PRJNA492406 32894 226 2.163399 4.88928174 Vannellidae 95227 Discosea other_Eukaryota 220 5.21e-53   NTclustered gi|327391633|gb|HM363631.1| 1002218 g32595 i0 93.878 65.0486725663717 147 8 65 1 1 146 417 271 Vannella sp. GERL34 small subunit ribosomal RNA gene, partial sequence blastn 14701 222 0.990990990990991 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. GERL34
18304404 18304404 PRJNA492406_P_NODE_6075_length_486_cov_27.765133_g5776_i0 PRJNA492406 6075 486 27.765133 134.93854638 Vannella septentrionalis 197531 Discosea other_Eukaryota 822 0   NTclustered gi|300078499|gb|GU001161.1| 197531 g5776 i0 99.341 64.3744855967078 455 1 93 1 1 453 2457 2911 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 31286 822 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
18950852 18950852 PRJNA492406_P_NODE_7255_length_448_cov_6.048000_g6956_i0 PRJNA492406 7255 448 6.048 27.09504 root 1 Root_unresolved Root_unresolved 75 9.26e-9   NTclustered gi|562028|gb|U12386.1|ACU12386 5755 g6956 i0 91.071 11.7723214285714 56 4 13 1 15 70 502 448 Acanthamoeba castellanii mitochondrion, complete genome blastn 5274 75 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
19578588 19578588 PRJNA492406_P_NODE_4736_length_549_cov_138.493697_g4441_i0 PRJNA492406 4736 549 138.493697 760.33039653 Cochliopodium kieliense 1512276 Discosea other_Eukaryota 808 0   NTclustered gi|659103927|gb|KJ569727.1| 1512276 g4441 i0 92.933 54.1530054644809 566 23 100 11 1 549 1429 1994 Cochliopodium kieliense clone 9611 18S ribosomal RNA gene, partial sequence blastn 29730 808 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium kieliense
19578642 19578642 PRJNA492406_P_NODE_6896_length_459_cov_5.774611_g6597_i0 PRJNA492406 6896 459 5.774611 26.50546449 Cochliopodium larifeili 1017091 Discosea other_Eukaryota 702 0   NTclustered gi|330902855|gb|JF298253.1| 1017091 g6597 i0 94.36 48.5228758169935 461 21 100 4 1 459 1414 1871 Cochliopodium larifeili clone 901 18S ribosomal RNA gene, partial sequence blastn 22272 702 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium larifeili
22129103 22129103 PRJNA492406_P_NODE_32958_length_206_cov_4.774436_g32659_i0 PRJNA492406 32958 206 4.774436 9.83533816 Vannella sp. LITHOV 1215650 Discosea other_Eukaryota 370 4.38e-98   NTclustered gi|399764235|gb|JQ271746.1| 1215650 g32659 i0 99.029 98.0728155339806 206 2 100 0 1 206 181 386 Vannella sp. LITHOV 18S ribosomal RNA gene, partial sequence blastn 20203 370 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. LITHOV
24678840 24678840 PRJNA492406_P_NODE_7640_length_438_cov_3.150685_g7341_i0 PRJNA492406 7640 438 3.150685 13.8000003 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 355 2.88e-93   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g7341 i0 81.567 99.6324200913242 434 76 99 4 1 432 2114 1683 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 43639 355 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;