contig_metadata
23 rows where analysis = "blastn", bioproject = "PRJNA492406" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1099366 | 1099366 | PRJNA492406_P_NODE_9181_length_404_cov_2.338369_g8882_i0 | PRJNA492406 | 9181 | 404 | 2.338369 | 9.44701076 | Parachlamydiales | 1963360 | Bacteria | Bacteria | 460 | 5.429999999999998e-125 | NTclustered | gi|194594624|gb|EU662269.1| | 112235 | g8882 | i0 | 87.376 | 181.556930693069 | 404 | 47 | 99 | 4 | 3 | 404 | 1105 | 1506 | Neochlamydia hartmannellae strain ATCC 50802 23S ribosomal RNA gene, partial sequence | blastn | 73349 | 460 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Neochlamydia | Neochlamydia hartmannellae | |
| 3003258 | 3003258 | PRJNA492406_P_NODE_25543_length_256_cov_1.213115_g25244_i0 | PRJNA492406 | 25543 | 256 | 1.213115 | 3.1055744 | Phycisphaera sp. | 2030824 | Bacteria | Bacteria | 296 | 9.74e-76 | NTclustered | gi|2323351239|gb|CP098402.1| | 2030824 | g25244 | i0 | 90.043 | 497.13671875 | 231 | 19 | 90 | 4 | 2 | 231 | 3046480 | 3046707 | MAG: Phycisphaera sp. isolate MAG12 chromosome | blastn | 127267 | 296 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaera | Phycisphaera sp. | |
| 3650336 | 3650336 | PRJNA492406_P_NODE_16883_length_304_cov_2.580087_g16584_i0 | PRJNA492406 | 16883 | 304 | 2.580087 | 7.84346448 | Parachlamydia | 83551 | Bacteria | Bacteria | 418 | 2.4199999999999993e-112 | NTclustered | gi|470491594|ref|NR_077046.1| | 83552 | g16584 | i0 | 91.475 | 87.4046052631579 | 305 | 24 | 100 | 2 | 1 | 304 | 1084 | 781 | Parachlamydia acanthamoebae strain UV-7 23S ribosomal RNA gene, complete sequence | blastn | 26571 | 418 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydia | Parachlamydia acanthamoebae | |
| 4279443 | 4279443 | PRJNA492406_P_NODE_18364_length_291_cov_1.059633_g18065_i0 | PRJNA492406 | 18364 | 291 | 1.059633 | 3.08353203 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 117 | 9.43e-22 | NTclustered | gi|1949774590|gb|CP066225.1| | 2026780 | g18065 | i0 | 90 | 28.6426116838488 | 90 | 9 | 31 | 0 | 193 | 282 | 4975449 | 4975538 | Planctomycetota bacterium strain ZRK32 chromosome, complete genome | blastn | 8335 | 117 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 4279782 | 4279782 | PRJNA492406_P_NODE_4224_length_584_cov_4.201566_g3930_i0 | PRJNA492406 | 4224 | 584 | 4.201566 | 24.53714544 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 647 | 0 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g3930 | i0 | 86.757 | 106.708904109589 | 589 | 69 | 100 | 8 | 1 | 584 | 654307 | 653723 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 62318 | 647 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 4927369 | 4927369 | PRJNA492406_P_NODE_21724_length_275_cov_1.465347_g21425_i0 | PRJNA492406 | 21724 | 275 | 1.465347 | 4.02970425 | Planctomycetota | 203682 | Bacteria | Bacteria | 233 | 8.41e-57 | NTclustered | gi|1927964719|gb|CP054188.1| | 2052181 | g21425 | i0 | 82.576 | 337.516363636364 | 264 | 46 | 96 | 0 | 1 | 264 | 585708 | 585971 | MAG: Planctomycetia bacterium isolate H1_AMX1 chromosome, complete genome | blastn | 92817 | 233 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetia bacterium | ||||
| 8105571 | 8105571 | PRJNA492406_P_NODE_20627_length_280_cov_1.937198_g20328_i0 | PRJNA492406 | 20627 | 280 | 1.937198 | 5.4241544 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 372 | 1.7399999999999995e-98 | NTclustered | gi|2874254096|emb|OY970179.1| | 412056 | g20328 | i0 | 91.039 | 132.657142857143 | 279 | 19 | 99 | 5 | 2 | 278 | 1728192 | 1728466 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05521.bin.c.1 genome assembly, chromosome: 1 | blastn | 37144 | 372 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 8752207 | 8752207 | PRJNA492406_P_NODE_2987_length_697_cov_2.440705_g2699_i0 | PRJNA492406 | 2987 | 697 | 2.440705 | 17.01171385 | Neochlamydia | 112987 | Bacteria | Bacteria | 725 | 0 | NTclustered | gi|194594624|gb|EU662269.1| | 112235 | g2699 | i0 | 87.231 | 111.219512195122 | 650 | 65 | 92 | 17 | 1 | 643 | 1505 | 2143 | Neochlamydia hartmannellae strain ATCC 50802 23S ribosomal RNA gene, partial sequence | blastn | 77520 | 725 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Neochlamydia | Neochlamydia hartmannellae | |
| 9380636 | 9380636 | PRJNA492406_P_NODE_508_length_1602_cov_2.741007_g384_i0 | PRJNA492406 | 508 | 1602 | 2.741007 | 43.91093214 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 1467 | 0 | NTclustered | gi|1927958621|gb|CP054186.1| | 2026777 | g384 | i0 | 83.488 | 442.92759051186 | 1617 | 223 | 99 | 35 | 4 | 1602 | 1867802 | 1866212 | MAG: Phycisphaeraceae bacterium isolate H1_PLA1 chromosome | blastn | 709570 | 1467 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 10656066 | 10656066 | PRJNA492406_P_NODE_16869_length_304_cov_3.186147_g16570_i0 | PRJNA492406 | 16869 | 304 | 3.186147 | 9.68588688 | Chlamydiales bacterium QZY | 2803004 | Bacteria | Bacteria | 289 | 1.9799999999999996e-73 | NTclustered | gi|1955632013|gb|MW471098.1| | 2803004 | g16570 | i0 | 90.783 | 40.7105263157895 | 217 | 19 | 71 | 1 | 1 | 217 | 252 | 37 | Chlamydiales bacterium QZY 16S ribosomal RNA gene, partial sequence | blastn | 12376 | 289 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium QZY | |||
| 13852796 | 13852796 | PRJNA492406_P_NODE_15031_length_323_cov_2.088000_g14732_i0 | PRJNA492406 | 15031 | 323 | 2.088 | 6.74424 | Bacteria | 2 | Bacteria | Bacteria | 503 | 6.97e-138 | NTclustered | gi|2874253890|emb|OY970065.1| | 2052178 | g14732 | i0 | 94.737 | 170.291021671827 | 323 | 17 | 100 | 0 | 1 | 323 | 627123 | 626801 | MAG: Parachlamydiales bacterium isolate MFD09286.bin.c.6 genome assembly, chromosome: 1 | blastn | 55004 | 503 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiales bacterium | |||
| 15127173 | 15127173 | PRJNA492406_P_NODE_10692_length_378_cov_1.259016_g10393_i0 | PRJNA492406 | 10692 | 378 | 1.259016 | 4.75908048 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 403 | 8.63e-108 | NTclustered | gi|5042360|gb|U68460.2|SSU68460 | 83561 | g10393 | i0 | 86.016 | 143.994708994709 | 379 | 49 | 100 | 4 | 1 | 378 | 4999 | 4624 | Simkania negevensis 16S and 23S ribosomal RNA operon, complete sequence; and putative endonuclease homodimer gene, complete cds | blastn | 54430 | 403 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Simkaniaceae | Simkania | Simkania negevensis | |
| 15127228 | 15127228 | PRJNA492406_P_NODE_18912_length_288_cov_1.790698_g18613_i0 | PRJNA492406 | 18912 | 288 | 1.790698 | 5.15721024 | Parachlamydia | 83551 | Bacteria | Bacteria | 276 | 1.45e-69 | NTclustered | gi|470491594|ref|NR_077046.1| | 83552 | g18613 | i0 | 84.192 | 135.739583333333 | 291 | 38 | 100 | 8 | 1 | 288 | 482 | 197 | Parachlamydia acanthamoebae strain UV-7 23S ribosomal RNA gene, complete sequence | blastn | 39093 | 276 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydia | Parachlamydia acanthamoebae | |
| 15127257 | 15127257 | PRJNA492406_P_NODE_22552_length_271_cov_1.176768_g22253_i0 | PRJNA492406 | 22552 | 271 | 1.176768 | 3.18904128 | Candidatus Protochlamydia | 282132 | Bacteria | Bacteria | 351 | 2.19e-92 | NTclustered | gi|1691252667|emb|BX908798.2| | 264201 | g22253 | i0 | 90.11 | 108.011070110701 | 273 | 23 | 100 | 3 | 1 | 271 | 1249436 | 1249166 | Candidatus Protochlamydia amoebophila UWE25 complete genome | blastn | 29271 | 351 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia amoebophila | |
| 17029991 | 17029991 | PRJNA492406_P_NODE_3434_length_647_cov_4.916376_g3144_i0 | PRJNA492406 | 3434 | 647 | 4.916376 | 31.80895272 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 723 | 0 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g3144 | i0 | 86.85 | 337.197836166924 | 654 | 76 | 100 | 6 | 1 | 647 | 654215 | 653565 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 218167 | 723 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 18303939 | 18303939 | PRJNA492406_P_NODE_15555_length_318_cov_1.257143_g15256_i0 | PRJNA492406 | 15555 | 318 | 1.257143 | 3.99771474 | Parachlamydiaceae bacterium | 2052176 | Bacteria | Bacteria | 211 | 4.65e-50 | NTclustered | gi|1869331976|gb|CP058704.1| | 2052176 | g15256 | i0 | 78.947 | 145.584905660377 | 323 | 58 | 100 | 10 | 1 | 318 | 835895 | 836212 | Parachlamydiaceae bacterium isolate SSA5 chromosome | blastn | 46296 | 211 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydiaceae bacterium | ||
| 18303977 | 18303977 | PRJNA492406_P_NODE_17175_length_301_cov_2.504386_g16876_i0 | PRJNA492406 | 17175 | 301 | 2.504386 | 7.53820186 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 392 | 1.4499999999999994e-104 | NTclustered | gi|1958061316|gb|CP064987.1| | 2052180 | g16876 | i0 | 91.034 | 325.102990033223 | 290 | 26 | 96 | 0 | 1 | 290 | 2192489 | 2192200 | Phycisphaerales bacterium isolate Fred_18-Q3-R57-64_MAXAC.330_cln chromosome, complete genome | blastn | 97856 | 392 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 19578263 | 19578263 | PRJNA492406_P_NODE_19856_length_284_cov_1.450237_g19557_i0 | PRJNA492406 | 19856 | 284 | 1.450237 | 4.11867308 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 520 | 5.98e-143 | NTclustered | gi|511202471|gb|KC994702.1| | 156588 | g19557 | i0 | 99.648 | 100.246478873239 | 284 | 1 | 100 | 0 | 1 | 284 | 408 | 125 | Uncultured Verrucomicrobia bacterium clone BF 022 16S ribosomal RNA gene, partial sequence | blastn | 28470 | 520 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 20854277 | 20854277 | PRJNA492406_P_NODE_29317_length_246_cov_0.890173_g29018_i0 | PRJNA492406 | 29317 | 246 | 0.890173 | 2.18982558 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 196 | 9.7e-46 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g29018 | i0 | 81.893 | 198.768292682927 | 243 | 35 | 98 | 9 | 1 | 239 | 653739 | 653976 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 48897 | 196 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 21501212 | 21501212 | PRJNA492406_P_NODE_5177_length_526_cov_4.205298_g4882_i0 | PRJNA492406 | 5177 | 526 | 4.205298 | 22.11986748 | Waddlia | 71666 | Bacteria | Bacteria | 394 | 7.44e-105 | NTclustered | gi|470485904|ref|NR_076723.1| | 71667 | g4882 | i0 | 80.529 | 170.467680608365 | 529 | 90 | 99 | 9 | 3 | 526 | 1188 | 1708 | Waddlia chondrophila strain WSU 86-1044 23S ribosomal RNA gene, complete sequence | blastn | 89666 | 394 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Waddliaceae | Waddlia | Waddlia chondrophila | |
| 22128916 | 22128916 | PRJNA492406_P_NODE_23678_length_265_cov_1.567708_g23379_i0 | PRJNA492406 | 23678 | 265 | 1.567708 | 4.1544262 | uncultured Planctomycetales bacterium | 100371 | Bacteria | Bacteria | 479 | 9.38e-131 | NTclustered | gi|673538887|gb|KJ611639.1| | 100371 | g23379 | i0 | 99.245 | 99.3320754716981 | 265 | 2 | 100 | 0 | 1 | 265 | 156 | 420 | Uncultured Planctomycetales bacterium clone Uvmin2_16 16S ribosomal RNA gene, partial sequence | blastn | 26323 | 479 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | uncultured Planctomycetales bacterium | |||
| 22129009 | 22129009 | PRJNA492406_P_NODE_27778_length_249_cov_0.875000_g27479_i0 | PRJNA492406 | 27778 | 249 | 0.875 | 2.17875 | Parachlamydiales bacterium | 2052178 | Bacteria | Bacteria | 124 | 4.709999999999999e-24 | NTclustered | gi|2874253843|emb|OY969899.1| | 2052178 | g27479 | i0 | 91.209 | 1.39759036144578 | 91 | 8 | 37 | 0 | 29 | 119 | 1297087 | 1296997 | MAG: Parachlamydiales bacterium isolate MFD00082.bin.c.1 genome assembly, chromosome: 1 | blastn | 348 | 124 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiales bacterium | |||
| 24678746 | 24678746 | PRJNA492406_P_NODE_3740_length_620_cov_2.868373_g3447_i0 | PRJNA492406 | 3740 | 620 | 2.868373 | 17.7839126 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 904 | 0 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g3447 | i0 | 93.076 | 156.970967741935 | 621 | 37 | 99 | 5 | 1 | 618 | 654209 | 654826 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 97322 | 904 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;