RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA492363" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA492363 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25625043 25625043 PRJNA492363_S_NODE_36889_length_238_cov_2.361582_g36068_i0 PRJNA492363 36889 238 2.361582 5.62056516 root 1 Root_unresolved Root_unresolved 80.5 9.81e-11   NTclustered gi|2099743938|emb|OU452413.1| 1049725 g36068 i0 100 183.323529411765 43 0 18 0 190 232 213 255 uncultured Glomeraceae partial 28S rRNA gene blastn 43631 80.5 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae   uncultured Glomeraceae
25897365 25897365 PRJNA492363_S_NODE_9675_length_309_cov_1.883065_g8854_i0 PRJNA492363 9675 309 1.883065 5.81867085 Mucor 4830 Fungi Fungi 571 1.7899999999999995e-158   NTclustered gi|2580278665|gb|OR581588.1| 4841 g8854 i0 100 97.6569579288026 309 0 100 0 1 309 934 626 Mucor racemosus culture VKM:F-579 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 30176 571 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus
26383443 26383443 PRJNA492363_S_NODE_79935_length_214_cov_1.254902_g79114_i0 PRJNA492363 79935 214 1.254902 2.68549028 Mucor velutinosus 708070 Fungi Fungi 305 1.31e-78   NTclustered gi|2724887233|ref|XM_064831176.1| 708070 g79114 i0 92.488 24.0514018691589 213 16 99 0 2 214 391 603 Mucor velutinosus ER-derived vesicles protein erv29 (ERV29_3), partial mRNA blastn 5147 305 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor velutinosus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;