RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA492363" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA492363 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25701719 25701719 PRJNA492363_S_NODE_10658_length_296_cov_1.736170_g9837_i0 PRJNA492363 10658 296 1.73617 5.1390632 Ignavibacteria bacterium 2053306 Bacteria Bacteria 200 9.279999999999999e-47   NTclustered gi|1938788434|gb|CP054181.1| 2053306 g9837 i0 93.333 145.706081081081 135 9 46 0 162 296 807405 807271 Ignavibacteria bacterium isolate H1_BAC2 chromosome blastn 43129 200 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
26033244 26033244 PRJNA492363_S_NODE_10332_length_300_cov_2.117155_g9511_i0 PRJNA492363 10332 300 2.117155 6.351465 Pseudomonadati 3379134 Bacteria Bacteria 361 4.08e-95   NTclustered gi|1938788434|gb|CP054181.1| 2053306 g9511 i0 88.333 4 300 35 100 0 1 300 574464 574165 Ignavibacteria bacterium isolate H1_BAC2 chromosome blastn 1200 361 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
26169348 26169348 PRJNA492363_S_NODE_115325_length_190_cov_2.364341_g114504_i0 PRJNA492363 115325 190 2.364341 4.4922479 Pseudomonadati 3379134 Bacteria Bacteria 294 2.46e-75   NTclustered gi|1938788434|gb|CP054181.1| 2053306 g114504 i0 96.111 3.78947368421053 180 7 95 0 11 190 574192 574013 Ignavibacteria bacterium isolate H1_BAC2 chromosome blastn 720 294 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;