contig_metadata
13 rows where analysis = "blastn", bioproject = "PRJNA492280" and tax_phylum = "Chloroflexota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3650288 | 3650288 | PRJNA492280_P_NODE_9523_length_173_cov_20.330882_g9416_i0 | PRJNA492280 | 9523 | 173 | 20.330882 | 35.17242586 | Caldilinea | 233191 | Bacteria | Bacteria | 276 | 7.92e-70 | NTclustered | gi|470476010|ref|NR_076314.1| | 133453 | g9416 | i0 | 95.376 | 104.64161849711 | 173 | 8 | 100 | 0 | 1 | 173 | 2443 | 2271 | Caldilinea aerophila strain STL-6-O1 23S ribosomal RNA gene, complete sequence | blastn | 18103 | 276 | 1 | Bacteria | Bacillati | Chloroflexota | Caldilineae | Caldilineales | Caldilineaceae | Caldilinea | Caldilinea aerophila | ||
| 4279212 | 4279212 | PRJNA492280_P_NODE_8524_length_182_cov_3.917241_g8417_i0 | PRJNA492280 | 8524 | 182 | 3.917241 | 7.12937862 | uncultured Chloroflexota bacterium | 166587 | Bacteria | Bacteria | 106 | 1.17e-18 | NTclustered | gi|374855139|dbj|AP011791.1| | 166587 | g8417 | i0 | 79.739 | 1.45604395604396 | 153 | 25 | 82 | 6 | 15 | 164 | 7911 | 8060 | Uncultured Chloroflexi bacterium DNA, fosmid clone: JFF053_H06 | blastn | 265 | 106 | 1 | Bacteria | Bacillati | Chloroflexota | uncultured Chloroflexota bacterium | ||||||
| 11930740 | 11930740 | PRJNA492280_P_NODE_5690_length_215_cov_6.483146_g5583_i0 | PRJNA492280 | 5690 | 215 | 6.483146 | 13.9387639 | uncultured Chloroflexia bacterium | 1672391 | Bacteria | Bacteria | 147 | 8.45e-31 | NTclustered | gi|2874254132|emb|OY970217.1| | 1672391 | g5583 | i0 | 89.076 | 75.7069767441861 | 119 | 11 | 55 | 2 | 1 | 118 | 3521967 | 3521850 | MAG: uncultured Chloroflexia bacterium isolate MFD05684.bin.1.130 genome assembly, chromosome: 1 | blastn | 16277 | 147 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | uncultured Chloroflexia bacterium | |||||
| 13205615 | 13205615 | PRJNA492280_P_NODE_13551_length_164_cov_5.346457_g13444_i0 | PRJNA492280 | 13551 | 164 | 5.346457 | 8.76818948 | Dehalococcoidia bacterium | 2026734 | Bacteria | Bacteria | 56.5 | 0.001 | NTclustered | gi|2621704077|emb|OY761541.1| | 2026734 | g13444 | i0 | 100 | 1.75 | 30 | 0 | 18 | 0 | 6 | 35 | 639799 | 639770 | MAG: Dehalococcoidia bacterium isolate f9b9afb7-0d58-404f-89de-58ff16bbafec genome assembly, chromosome: 1 | blastn | 287 | 56.5 | 1 | Bacteria | Bacillati | Chloroflexota | Dehalococcoidia | Dehalococcoidia bacterium | |||||
| 13852686 | 13852686 | PRJNA492280_P_NODE_5531_length_218_cov_6.524862_g5424_i0 | PRJNA492280 | 5531 | 218 | 6.524862 | 14.22419916 | Dehalogenimonas | 670486 | Bacteria | Bacteria | 67.6 | 6.88e-7 | NTclustered | gi|470486512|ref|NR_076762.1| | 552810 | g5424 | i0 | 89.286 | 0.513761467889908 | 56 | 3 | 25 | 3 | 1 | 54 | 419 | 365 | Dehalogenimonas lykanthroporepellens strain BL-DC-9 23S ribosomal RNA gene, complete sequence | blastn | 112 | 67.6 | 1 | Bacteria | Bacillati | Chloroflexota | Dehalococcoidia | Dehalococcoidales | Dehalococcoidaceae | Dehalogenimonas | Dehalogenimonas lykanthroporepellens | ||
| 18303553 | 18303553 | PRJNA492280_P_NODE_19855_length_164_cov_3.354331_g19748_i0 | PRJNA492280 | 19855 | 164 | 3.354331 | 5.50110284 | Caldilineaceae bacterium | 2614250 | Bacteria | Bacteria | 195 | 2.15e-45 | NTclustered | gi|2575803493|emb|OY729430.1| | 2614250 | g19748 | i0 | 85.455 | 107.243902439024 | 165 | 21 | 99 | 2 | 1 | 162 | 1510917 | 1510753 | MAG: Caldilineaceae bacterium isolate ee78b5b4-03fb-4fb3-b3ee-46148e6ffba5 genome assembly, chromosome: 1 | blastn | 17588 | 195 | 1 | Bacteria | Bacillati | Chloroflexota | Caldilineae | Caldilineales | Caldilineaceae | Caldilineaceae bacterium | |||
| 19577696 | 19577696 | PRJNA492280_P_NODE_12896_length_164_cov_5.913386_g12789_i0 | PRJNA492280 | 12896 | 164 | 5.913386 | 9.69795304 | Dehalococcoidia bacterium | 2026734 | Bacteria | Bacteria | 69.4 | 1.36e-7 | NTclustered | gi|2626282194|emb|OY839116.1| | 2026734 | g12789 | i0 | 97.5 | 0.24390243902439 | 40 | 1 | 24 | 0 | 15 | 54 | 2064383 | 2064344 | MAG: Dehalococcoidia bacterium isolate 44b3abb6-b6b9-4f11-be96-93ee54cc77f6 genome assembly, chromosome: 1 | blastn | 40 | 69.4 | 1 | Bacteria | Bacillati | Chloroflexota | Dehalococcoidia | Dehalococcoidia bacterium | |||||
| 22128298 | 22128298 | PRJNA492280_P_NODE_1498_length_361_cov_3.533951_g1395_i0 | PRJNA492280 | 1498 | 361 | 3.533951 | 12.75756311 | uncultured Chloroflexota bacterium | 166587 | Bacteria | Bacteria | 228 | 5.2999999999999996e-55 | NTclustered | gi|374855139|dbj|AP011791.1| | 166587 | g1395 | i0 | 92.994 | 55.2797783933518 | 157 | 10 | 68 | 1 | 4 | 160 | 8221 | 8376 | Uncultured Chloroflexi bacterium DNA, fosmid clone: JFF053_H06 | blastn | 19956 | 228 | 1 | Bacteria | Bacillati | Chloroflexota | uncultured Chloroflexota bacterium | ||||||
| 23404210 | 23404210 | PRJNA492280_P_NODE_18499_length_164_cov_3.590551_g18392_i0 | PRJNA492280 | 18499 | 164 | 3.590551 | 5.88850364 | Thermosporothrix sp. COM3 | 2490863 | Bacteria | Bacteria | 56.5 | 0.001 | NTclustered | gi|1606557374|dbj|AP019376.1| | 2490863 | g18392 | i0 | 100 | 1.09756097560976 | 30 | 0 | 18 | 0 | 125 | 154 | 3564639 | 3564610 | Thermosporothrix sp. COM3 DNA, nearly complete genome | blastn | 180 | 56.5 | 1 | Bacteria | Bacillati | Chloroflexota | Ktedonobacteria | Ktedonobacterales | Thermosporotrichaceae | Thermosporothrix | Thermosporothrix sp. COM3 | ||
| 24050801 | 24050801 | PRJNA492280_P_NODE_22599_length_164_cov_2.921260_g22492_i0 | PRJNA492280 | 22599 | 164 | 2.92126 | 4.7908664 | root | 1 | Root_unresolved | Root_unresolved | 58.4 | 2.94e-4 | NTclustered | gi|269790643|gb|CP001826.1| | 525904 | g22492 | i0 | 97.059 | 1.1890243902439 | 34 | 1 | 21 | 0 | 111 | 144 | 1052775 | 1052808 | Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete sequence | blastn | 195 | 58.4 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Candidatus Thermobaculales | Candidatus Thermobaculaceae | Thermobaculum | Thermobaculum terrenum | ||
| 24678130 | 24678130 | PRJNA492280_P_NODE_33680_length_150_cov_3.743363_g33573_i0 | PRJNA492280 | 33680 | 150 | 3.743363 | 5.6150445 | Chloroflexus aurantiacus | 1108 | Bacteria | Bacteria | 67.6 | 4.36e-7 | NTclustered | gi|163666892|gb|CP000909.1| | 324602 | g33573 | i0 | 88.889 | 1.39333333333333 | 54 | 6 | 36 | 0 | 90 | 143 | 3507298 | 3507351 | Chloroflexus aurantiacus J-10-fl, complete genome | blastn | 209 | 67.6 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Chloroflexales | Chloroflexaceae | Chloroflexus | Chloroflexus aurantiacus | ||
| 25324961 | 25324961 | PRJNA492280_P_NODE_10420_length_167_cov_4.184615_g10313_i0 | PRJNA492280 | 10420 | 167 | 4.184615 | 6.98830705 | Bacteria | 2 | Bacteria | Bacteria | 76.8 | 8.31e-10 | NTclustered | gi|470482818|ref|NR_076553.1| | 1108 | g10313 | i0 | 100 | 11.1616766467066 | 41 | 0 | 25 | 0 | 31 | 71 | 493 | 533 | Chloroflexus aurantiacus strain J-10-fl 23S ribosomal RNA gene, complete sequence | blastn | 1864 | 76.8 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Chloroflexales | Chloroflexaceae | Chloroflexus | Chloroflexus aurantiacus | ||
| 25324982 | 25324982 | PRJNA492280_P_NODE_11580_length_164_cov_9.606299_g11473_i0 | PRJNA492280 | 11580 | 164 | 9.606299 | 15.75433036 | Caldilinea | 233191 | Bacteria | Bacteria | 95.3 | 2.24e-15 | NTclustered | gi|470476010|ref|NR_076314.1| | 133453 | g11473 | i0 | 89.474 | 66.469512195122 | 76 | 7 | 46 | 1 | 89 | 164 | 1616 | 1690 | Caldilinea aerophila strain STL-6-O1 23S ribosomal RNA gene, complete sequence | blastn | 10901 | 95.3 | 1 | Bacteria | Bacillati | Chloroflexota | Caldilineae | Caldilineales | Caldilineaceae | Caldilinea | Caldilinea aerophila |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;