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contig_metadata

33 rows where analysis = "blastn", bioproject = "PRJNA492280" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 33 ✖

bioproject 1

  • PRJNA492280 · 33 ✖

analysis 1

  • blastn · 33 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
451936 451936 PRJNA492280_P_NODE_13001_length_164_cov_5.803150_g12894_i0 PRJNA492280 13001 164 5.80315 9.517166 Nannochloris normandinae 926285 Plants Plants 141 2.84e-29   NTclustered gi|922575245|gb|JQ921007.1| 926285 g12894 i0 100 40.9268292682927 76 0 92 0 89 164 948 1023 Nannochloris normandinae strain SAG 9.82 23S large subunit ribosomal RNA gene, partial sequence; chloroplast blastn 6712 141 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Nannochloris Nannochloris normandinae
452189 452189 PRJNA492280_P_NODE_5181_length_224_cov_3.502674_g5074_i0 PRJNA492280 5181 224 3.502674 7.84598976 Parachlorella kessleri 3074 Plants Plants 283 6.479999999999999e-72   NTclustered gi|254798615|ref|NC_012978.1| 3074 g5074 i0 90.95 128.459821428571 221 4 99 1 1 221 92083 91879 Parachlorella kessleri chloroplast, complete genome blastn 28775 283 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Parachlorella Parachlorella kessleri
452218 452218 PRJNA492280_P_NODE_7241_length_194_cov_5.382166_g7134_i0 PRJNA492280 7241 194 5.382166 10.44140204 Prototheca wickerhamii 3111 Plants Plants 97.1 7.63e-16   NTclustered gi|14212|emb|X68722.1| 3111 g7134 i0 89.474 1.75773195876289 76 8 39 0 53 128 3763 3688 P.wickerhamii mitochondrial gene for large ribosomal RNA blastn 341 97.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca wickerhamii
1726764 1726764 PRJNA492280_P_NODE_28322_length_156_cov_4.924370_g28215_i0 PRJNA492280 28322 156 4.92437 7.6820172 Jenufa perforata 993091 Plants Plants 78.7 2.12e-10   NTclustered gi|959124266|ref|NC_028581.1| 993091 g28215 i0 94.231 47.4679487179487 52 2 33 1 76 126 8888 8939 Jenufa perforata culture-collection CAUP:H 8101 chloroplast, complete genome blastn 7405 78.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae     Jenufa Jenufa perforata
2374322 2374322 PRJNA492280_P_NODE_14062_length_164_cov_5.015748_g13955_i0 PRJNA492280 14062 164 5.015748 8.22582672 Choricystis 41299 Plants Plants 69.4 1.36e-7   NTclustered gi|1467029762|gb|MH818560.1| 41300 g13955 i0 90.385 1.58536585365854 52 5 32 0 90 141 342 393 Choricystis parasitica isolate BUCH09 large subunit ribosomal RNA gene, partial sequence; chloroplast blastn 260 69.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae     Choricystis Choricystis parasitica
4278918 4278918 PRJNA492280_P_NODE_11184_length_165_cov_3.078125_g11077_i0 PRJNA492280 11184 165 3.078125 5.07890625 Chloroidium sp. KL-2023a 3031248 Plants Plants 139 1.03e-28   NTclustered gi|2450595352|gb|ON986219.1| 3031248 g11077 i0 100 14.8848484848485 75 0 90 0 4 78 221785 221711 Chloroidium sp. KL-2023a clone 2023 chloroplast, complete genome blastn 2456 139 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Chloroidium Chloroidium sp. KL-2023a
4279195 4279195 PRJNA492280_P_NODE_6764_length_200_cov_4.447853_g6657_i0 PRJNA492280 6764 200 4.447853 8.895706 Marsupiomonas sp. NIES 1824 1562198 Plants Plants 119 1.69e-22   NTclustered gi|698348611|gb|KM462870.1| 1562198 g6657 i0 89.474 47.97 95 8 47 2 9 102 72746 72653 Marsupiomonas sp. NIES 1824 chloroplast, complete genome blastn 9594 119 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Pedinophyceae Marsupiomonadales Marsupiomonadaceae Marsupiomonas Marsupiomonas sp. NIES 1824
4927232 4927232 PRJNA492280_P_NODE_7564_length_191_cov_3.493506_g7457_i0 PRJNA492280 7564 191 3.493506 6.67259646 Bracteacoccus 50036 Plants Plants 189 1.1999999999999999e-43   NTclustered gi|959124681|ref|NC_028586.1| 50039 g7457 i0 100 88.0890052356021 102 0 53 0 1 102 110989 110888 Bracteacoccus giganteus culture-collection UTEX:1251 chloroplast, complete genome blastn 16825 189 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Bracteacoccaceae Bracteacoccus Bracteacoccus giganteus
5555489 5555489 PRJNA492280_P_NODE_1545_length_356_cov_14.492163_g1439_i0 PRJNA492280 1545 356 14.492163 51.59210028 Koliella corcontica 155904 Plants Plants 298 3.92e-76   NTclustered gi|723456950|ref|NC_025536.1| 155904 g1439 i0 87.795 83.6432584269663 254 31 71 0 6 259 83323 83576 Koliella corcontica culture-collection SAG:24.84 chloroplast, complete genome blastn 29777 298 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Prasiolales Koliellaceae Koliella Koliella corcontica
6202126 6202126 PRJNA492280_P_NODE_2945_length_279_cov_3.181818_g2838_i0 PRJNA492280 2945 279 3.181818 8.87727222 Mucidosphaerium 1036744 Plants Plants 222 1.85e-53   NTclustered gi|595333730|gb|KF944973.1| 1476389 g2838 i0 91.875 59.1899641577061 160 11 57 2 1 158 1054 895 Uncultured Closteriopsis clone GW3C3 16S ribosomal RNA gene, partial sequence; plastid blastn 16514 222 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales     uncultured Closteriopsis
7476795 7476795 PRJNA492280_P_NODE_13146_length_164_cov_5.661417_g13039_i0 PRJNA492280 13146 164 5.661417 9.28472388 Trebouxiaceae 2507902 Plants Plants 156 1.01e-33   NTclustered gi|725650801|ref|NC_025532.1| 3102 g13039 i0 81.657 93.1036585365854 169 23 98 3 4 164 121844 122012 Ettlia pseudoalveolaris culture-collection UTEX:975 chloroplast, complete genome blastn 15269 156 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Parietochloris Parietochloris pseudoalveolaris
9379982 9379982 PRJNA492280_P_NODE_4408_length_239_cov_8.965347_g4301_i0 PRJNA492280 4408 239 8.965347 21.42717933 Chloroidium ellipsoideum 63676 Plants Plants 381 2.4099999999999995e-101   NTclustered gi|1169296931|gb|KY364701.1| 63676 g4301 i0 95.763 99.0125523012552 236 10 99 0 4 239 3909 4144 Chloroidium ellipsoideum 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 23664 381 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Chloroidium Chloroidium ellipsoideum
10027060 10027060 PRJNA492280_P_NODE_1048_length_431_cov_9.388325_g950_i0 PRJNA492280 1048 431 9.388325 40.46368075 Dictyosphaerium 247496 Plants Plants 503 9.549999999999998e-138   NTclustered gi|1231294795|gb|MF664508.1| 2026434 g950 i0 92.625 87.1670533642691 339 21 78 2 1 335 2490 2828 Dictyosphaerium sp. wfA1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 37569 503 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Dictyosphaerium Dictyosphaerium sp. wfA1
10027187 10027187 PRJNA492280_P_NODE_2108_length_316_cov_7.652330_g2001_i0 PRJNA492280 2108 316 7.65233 24.1813628 Eukaryota 2759 Plants Plants 401 2.5499999999999992e-107   NTclustered gi|1714003650|gb|MN243923.1| 3079 g2001 i0 88.438 98.0063291139241 320 25 98 6 6 316 881 565 Chlorella sp. isolate CAVR01 small subunit ribosomal RNA gene, partial sequence blastn 30970 401 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sp.
11302113 11302113 PRJNA492280_P_NODE_2549_length_293_cov_5.695312_g2442_i0 PRJNA492280 2549 293 5.695312 16.68726416 Eukaryota 2759 Plants Plants 296 1.14e-75   NTclustered gi|1714003650|gb|MN243923.1| 3079 g2442 i0 97.688 88.80204778157 173 3 95 1 121 293 736 565 Chlorella sp. isolate CAVR01 small subunit ribosomal RNA gene, partial sequence blastn 26019 296 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sp.
11930560 11930560 PRJNA492280_P_NODE_19810_length_164_cov_3.370079_g19703_i0 PRJNA492280 19810 164 3.370079 5.52692956 Bracteacoccus aerius 50041 Plants Plants 111 2.23e-20   NTclustered gi|1008861732|ref|NC_029675.1| 50041 g19703 i0 98.413 34.5121951219512 63 1 76 0 102 164 4853 4791 Bracteacoccus aerius strain UTEX 1250 chloroplast, complete genome blastn 5660 111 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Bracteacoccaceae Bracteacoccus Bracteacoccus aerius
11930638 11930638 PRJNA492280_P_NODE_28850_length_153_cov_4.344828_g28743_i0 PRJNA492280 28850 153 4.344828 6.64758684 Pleurastrum insigne 34115 Plants Plants 204 3.2699999999999995e-48   NTclustered gi|1509779762|gb|MG940908.1| 34115 g28743 i0 90.361 78.4771241830065 166 0 98 1 1 150 460 295 Pleurastrum insigne small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 12007 204 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Pleurastraceae Pleurastrum Pleurastrum insigne
12577982 12577982 PRJNA492280_P_NODE_3210_length_270_cov_6.536481_g3103_i0 PRJNA492280 3210 270 6.536481 17.6484987 Eukaryota 2759 Plants Plants 226 1.38e-54   NTclustered gi|66864275|gb|DQ015730.1| 56011 g3103 i0 93.96 55.4444444444444 149 9 55 0 119 267 1544 1396 Paulschulzia pseudovolvox strain UTEX 167 26S ribosomal RNA gene, partial sequence blastn 14970 226 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales   Paulschulzia Paulschulzia pseudovolvox
13205774 13205774 PRJNA492280_P_NODE_30271_length_151_cov_4.552632_g30164_i0 PRJNA492280 30271 151 4.552632 6.87447432 Marsupiomonas pelliculata 1034818 Plants Plants 128 1.9899999999999999e-25   NTclustered gi|371782138|emb|HE610170.1| 1034818 g30164 i0 96.203 82.9470198675497 79 1 52 2 74 151 2569 2646 Marsupiomonas pelliculata plastid 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain PLY 441 blastn 12525 128 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Pedinophyceae Marsupiomonadales Marsupiomonadaceae Marsupiomonas Marsupiomonas pelliculata
14480679 14480679 PRJNA492280_P_NODE_3172_length_271_cov_12.965812_g3065_i0 PRJNA492280 3172 271 12.965812 35.13735052 Symbiochloris reticulata 40981 Plants Plants 126 1.44e-24   NTclustered gi|2370962663|gb|OP932030.1| 40981 g3065 i0 93.976 34.7675276752768 83 5 31 0 180 262 397 315 Symbiochloris reticulata isolate VE5 large subunit ribosomal RNA gene, partial sequence; chloroplast blastn 9422 126 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris reticulata
15754577 15754577 PRJNA492280_P_NODE_22813_length_164_cov_2.889764_g22706_i0 PRJNA492280 22813 164 2.889764 4.73921296 Ostreobium sp. J EC-2016 1905041 Plants Plants 110 8.01e-20   NTclustered gi|1071347977|gb|KT795105.1| 1905041 g22706 i0 94.444 44.0914634146341 72 2 43 2 91 161 614 684 Ostreobium sp. J EC-2016 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast blastn 7231 110 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Ostreobiaceae Ostreobium Ostreobium sp. J EC-2016
17029457 17029457 PRJNA492280_P_NODE_9794_length_171_cov_9.350746_g9687_i0 PRJNA492280 9794 171 9.350746 15.98977566 Fusochloris perforata 106203 Plants Plants 86.1 1.41e-12   NTclustered gi|6120007|gb|AF183467.1| 106203 g9687 i0 100 26.8830409356725 46 0 27 0 2 47 2064 2019 Fusochloris perforata strain UTEX 2104 28S ribosomal RNA gene, partial sequence blastn 4597 86.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Microthamniales Microthamniaceae Fusochloris Fusochloris perforata
17676475 17676475 PRJNA492280_P_NODE_16234_length_164_cov_4.157480_g16127_i0 PRJNA492280 16234 164 4.15748 6.8182672 Chlorophyceae 3166 Plants Plants 139 1.02e-28   NTclustered gi|1212783794|gb|MF083691.1| 3055 g16127 i0 100 66.7682926829268 75 0 46 0 89 163 41249 41323 Chlamydomonas reinhardtii strain CC-1051 M18 (ac9) mt+ chloroplast, complete genome blastn 10950 139 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
17676502 17676502 PRJNA492280_P_NODE_1874_length_330_cov_7.358362_g1767_i0 PRJNA492280 1874 330 7.358362 24.2825946 Eukaryota 2759 Plants Plants 453 7.29e-123   NTclustered gi|1714003650|gb|MN243923.1| 3079 g1767 i0 91.718 97.6454545454545 326 17 98 5 6 330 881 565 Chlorella sp. isolate CAVR01 small subunit ribosomal RNA gene, partial sequence blastn 32223 453 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sp.
18950329 18950329 PRJNA492280_P_NODE_12095_length_164_cov_7.244094_g11988_i0 PRJNA492280 12095 164 7.244094 11.88031416 Coccomyxa 41891 Plants Plants 56.5 0.001   NTclustered gi|1360638129|gb|AC277064.1| 574566 g11988 i0 92.5 0.975609756097561 40 2 24 1 97 136 1682 1644 Coccomyxa subellipsoidea C-169 clone FAHX137-B20, complete sequence blastn 160 56.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
18950641 18950641 PRJNA492280_P_NODE_7815_length_188_cov_17.132450_g7708_i0 PRJNA492280 7815 188 17.13245 32.209006 Chlorophyta 3041 Plants Plants 281 1.89e-71   NTclustered gi|922575247|gb|JQ921009.1| 13788 g7708 i0 94.054 116.946808510638 185 11 98 0 1 185 282 98 Trebouxia impressa strain UTEX 893 23S large subunit ribosomal RNA gene, partial sequence; and putative LAGLIDADG homing endonuclease gene, complete cds; chloroplast blastn 21986 281 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia impressa
20853765 20853765 PRJNA492280_P_NODE_4277_length_242_cov_10.380488_g4170_i0 PRJNA492280 4277 242 10.380488 25.12078096 Dicloster acuatus 91190 Plants Plants 333 6.949999999999999e-87   NTclustered gi|1467029761|gb|MH818559.1| 91190 g4170 i0 91.12 100.681818181818 259 4 99 1 1 240 604 346 Dicloster acuatus isolate C.HOOV large subunit ribosomal RNA gene, partial sequence; chloroplast blastn 24365 333 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Dicloster Dicloster acuatus
22128262 22128262 PRJNA492280_P_NODE_10898_length_165_cov_5.289062_g10791_i0 PRJNA492280 10898 165 5.289062 8.7269523 Dicloster acuatus 91190 Plants Plants 130 6.2e-26   NTclustered gi|725651324|ref|NC_025546.1| 91190 g10791 i0 98.63 79.1030303030303 73 1 79 0 90 162 98482 98410 Dicloster acuatus culture-collection SAG:41.98 chloroplast, complete genome blastn 13052 130 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Dicloster Dicloster acuatus
22128401 22128401 PRJNA492280_P_NODE_27038_length_163_cov_2.865079_g26931_i0 PRJNA492280 27038 163 2.865079 4.67007877 Coccomyxa subellipsoidea 248742 Plants Plants 52.8 0.014   NTclustered gi|545374190|ref|XM_005651349.1| 574566 g26931 i0 100 0.171779141104294 28 0 17 0 23 50 1137 1110 Coccomyxa subellipsoidea C-169 hypothetical protein partial mRNA blastn 28 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
22776071 22776071 PRJNA492280_P_NODE_3378_length_264_cov_14.312775_g3271_i0 PRJNA492280 3378 264 14.312775 37.785726 Trebouxiophyceae 75966 Plants Plants 464 2.6099999999999998e-126   NTclustered gi|1843816192|gb|MT497368.1| 3074 g3271 i0 99.222 97.3560606060606 257 2 97 0 4 260 18 274 Parachlorella kessleri isolate M-009-18S small subunit ribosomal RNA gene, partial sequence blastn 25702 464 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Parachlorella Parachlorella kessleri
23404291 23404291 PRJNA492280_P_NODE_27359_length_162_cov_3.584000_g27252_i0 PRJNA492280 27359 162 3.584 5.80608 Prasiola crispa 173492 Plants Plants 204 3.52e-48   NTclustered gi|806639636|gb|KR017749.1| 173492 g27252 i0 91.333 129.703703703704 150 12 93 1 12 161 3069 2921 Prasiola crispa clone Contig2 chloroplast sequence blastn 21012 204 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Prasiolales Prasiolaceae Prasiola Prasiola crispa
24050775 24050775 PRJNA492280_P_NODE_1979_length_323_cov_6.174825_g1872_i0 PRJNA492280 1979 323 6.174825 19.94468475 Eukaryota 2759 Plants Plants 536 6.87e-148   NTclustered gi|1714003650|gb|MN243923.1| 3079 g1872 i0 97.17 97.28173374613 318 8 98 1 6 323 881 565 Chlorella sp. isolate CAVR01 small subunit ribosomal RNA gene, partial sequence blastn 31422 536 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sp.
25325281 25325281 PRJNA492280_P_NODE_6240_length_207_cov_3.111765_g6133_i0 PRJNA492280 6240 207 3.111765 6.44135355 Coccomyxa 41891 Plants Plants 183 6.16e-42   NTclustered gi|563403693|emb|HE617184.1| 167235 g6133 i0 100 91.8212560386473 99 0 92 0 5 103 192 290 Uncultured Trebouxiophyceae partial 18S rRNA gene, isolate RL75K2 blastn 19007 183 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae       uncultured Trebouxiophyceae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;