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contig_metadata

18 rows where analysis = "blastn", bioproject = "PRJNA492280" and tax_clade = "Amoebozoa"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 18 ✖

bioproject 1

  • PRJNA492280 · 18 ✖

analysis 1

  • blastn · 18 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1099125 1099125 PRJNA492280_P_NODE_7721_length_189_cov_6.815789_g7614_i0 PRJNA492280 7721 189 6.815789 12.88184121 Vermamoeba 1260114 Tubulinea other_Eukaryota 335 1.4399999999999993e-87   NTclustered gi|157688394|gb|DQ123623.2| 5778 g7614 i0 100 95.7671957671958 181 0 96 0 4 184 189 369 Hartmannella vermiformis strain CRIB-06 18S ribosomal RNA gene, complete sequence blastn 18100 335 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
3650065 3650065 PRJNA492280_P_NODE_26603_length_163_cov_5.404762_g26496_i0 PRJNA492280 26603 163 5.404762 8.80976206 Physariida 5789 Evosea other_Eukaryota 139 1.01e-28   NTclustered gi|3221|emb|V01159.1| 5791 g26496 i0 100 44.8282208588957 75 0 92 0 1 75 1839 1765 Physarum polycephalum gene encoding 5.8S rRNA and 26S rRNA blastn 7307 139 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
6829468 6829468 PRJNA492280_P_NODE_15706_length_164_cov_4.338583_g15599_i0 PRJNA492280 15706 164 4.338583 7.11527612 Dianema subretisporum 1182205 Evosea other_Eukaryota 117 4.79e-22   NTclustered gi|2250222329|gb|ON713412.1| 1182205 g15599 i0 95.833 45.4939024390244 72 3 44 0 4 75 489 560 Dianema subretisporum voucher MM31413 small subunit ribosomal RNA gene, partial sequence blastn 7461 117 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Trichiida Dianemataceae Dianema Dianema subretisporum
6829693 6829693 PRJNA492280_P_NODE_6966_length_198_cov_2.633540_g6859_i0 PRJNA492280 6966 198 2.63354 5.2144092 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 219 1.6e-52   NTclustered gi|292559443|ref|NC_013986.1| 5778 g6859 i0 96.241 37.6515151515151 133 5 67 0 1 133 20187 20055 Hartmannella vermiformis mitochondrion, complete genome blastn 7455 219 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
10655813 10655813 PRJNA492280_P_NODE_3829_length_252_cov_4.581395_g3722_i0 PRJNA492280 3829 252 4.581395 11.5451154 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 459 1.1499999999999996e-124   NTclustered gi|300078496|gb|GU001158.1| 5778 g3722 i0 99.602 2.43650793650794 251 1 99 0 2 252 3666 3416 Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 614 459 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
13205761 13205761 PRJNA492280_P_NODE_29091_length_152_cov_4.721739_g28984_i0 PRJNA492280 29091 152 4.721739 7.17704328 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 132 1.5500000000000002e-26   NTclustered gi|292559443|ref|NC_013986.1| 5778 g28984 i0 86.555 0.782894736842105 119 16 78 0 3 121 25589 25707 Hartmannella vermiformis mitochondrion, complete genome blastn 119 132 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
13205852 13205852 PRJNA492280_P_NODE_5131_length_225_cov_2.718085_g5024_i0 PRJNA492280 5131 225 2.718085 6.11569125 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 300 6.47e-77   NTclustered gi|909719645|gb|KT185625.1| 5778 g5024 i0 91.031 0.991111111111111 223 19 99 1 1 222 896 674 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 223 300 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
15127078 15127078 PRJNA492280_P_NODE_472_length_612_cov_193.608696_g397_i0 PRJNA492280 472 612 193.608696 1184.88521952 Vermamoeba 1260114 Tubulinea other_Eukaryota 1092 0   NTclustered gi|909719645|gb|KT185625.1| 5778 g397 i0 98.856 67.0179738562092 612 7 100 0 1 612 4930 5541 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 41015 1092 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
16401483 16401483 PRJNA492280_P_NODE_2233_length_309_cov_6.834559_g2126_i0 PRJNA492280 2233 309 6.834559 21.11878731 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 556 5.02e-154   NTclustered gi|300078496|gb|GU001158.1| 5778 g2126 i0 99.349 58.4660194174757 307 2 99 0 3 309 929 1235 Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 18066 556 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
17029134 17029134 PRJNA492280_P_NODE_1034_length_433_cov_65.646465_g936_i0 PRJNA492280 1034 433 65.646465 284.24919345 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 749 0   NTclustered gi|300078496|gb|GU001158.1| 5778 g936 i0 99.755 25.4757505773672 408 1 94 0 26 433 1210 1617 Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 11031 749 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
17029322 17029322 PRJNA492280_P_NODE_28194_length_157_cov_3.866667_g28087_i0 PRJNA492280 28194 157 3.866667 6.07066719 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 220 3.36e-53   NTclustered gi|909719647|gb|KT185627.1| 5778 g28087 i0 93.333 1.93630573248408 150 8 95 2 7 155 26758 26610 Vermamoeba vermiformis isolate BCP-EM3VF21-2 mitochondrion, complete genome blastn 304 220 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
17029390 17029390 PRJNA492280_P_NODE_4014_length_249_cov_2.910377_g3907_i0 PRJNA492280 4014 249 2.910377 7.24683873 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 274 4.42e-69   NTclustered gi|909719647|gb|KT185627.1| 5778 g3907 i0 98.701 40.0401606425703 154 2 62 0 90 243 19941 20094 Vermamoeba vermiformis isolate BCP-EM3VF21-2 mitochondrion, complete genome blastn 9970 274 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
20853687 20853687 PRJNA492280_P_NODE_2897_length_280_cov_8.835391_g2790_i0 PRJNA492280 2897 280 8.835391 24.7390948 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 484 2.15e-132   NTclustered gi|909719645|gb|KT185625.1| 5778 g2790 i0 97.857 1.81428571428571 280 6 100 0 1 280 6817 7096 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 508 484 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
20853812 20853812 PRJNA492280_P_NODE_8497_length_182_cov_5.786207_g8390_i0 PRJNA492280 8497 182 5.786207 10.53089674 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 171 4.1e-38   NTclustered gi|909719645|gb|KT185625.1| 5778 g8390 i0 100 2.92857142857143 92 0 97 0 88 179 5696 5787 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 533 171 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
20853813 20853813 PRJNA492280_P_NODE_8677_length_181_cov_2.263889_g8570_i0 PRJNA492280 8677 181 2.263889 4.09763909 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 263 6.519999999999999e-66   NTclustered gi|909719645|gb|KT185625.1| 5778 g8570 i0 93.258 0.983425414364641 178 12 98 0 1 178 474 297 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 178 263 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
23404451 23404451 PRJNA492280_P_NODE_7599_length_190_cov_13.196078_g7492_i0 PRJNA492280 7599 190 13.196078 25.0725482 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 296 6.83e-76   NTclustered gi|292559443|ref|NC_013986.1| 5778 g7492 i0 95.187 60.3105263157895 187 9 98 0 4 190 27047 27233 Hartmannella vermiformis mitochondrion, complete genome blastn 11459 296 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
23404459 23404459 PRJNA492280_P_NODE_819_length_486_cov_5.483296_g726_i0 PRJNA492280 819 486 5.483296 26.64881856 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 479 1.8299999999999993e-130   NTclustered gi|300078496|gb|GU001158.1| 5778 g726 i0 98.175 50.4218106995885 274 5 56 0 3 276 1932 2205 Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 24505 479 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
24050845 24050845 PRJNA492280_P_NODE_26919_length_163_cov_3.293651_g26812_i0 PRJNA492280 26919 163 3.293651 5.36865113 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 104 3.7e-18   NTclustered gi|2687|emb|X60210.1| 5793 g26812 i0 92.958 4.77914110429448 71 5 44 0 6 76 1398 1468 D.iridis LSU rRNA gene blastn 779 104 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium iridis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;