RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA489308" and tax_phylum = "Zoopagomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA489308 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
450187 450187 PRJNA489308_P_NODE_15161_length_312_cov_2.255230_g15085_i0 PRJNA489308 15161 312 2.25523 7.0363176 Linderina pennispora 61395 Fungi Fungi 231 3.4899999999999997e-56   NTclustered gi|2028323872|ref|XM_040889531.1| 61395 g15085 i0 80.449 63.5961538461538 312 53 99 6 1 308 1405 1712 Linderina pennispora glucose-regulated protein (DL89DRAFT_278812), partial mRNA blastn 19842 231 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
450347 450347 PRJNA489308_P_NODE_36701_length_243_cov_2.129412_g36625_i0 PRJNA489308 36701 243 2.129412 5.17447116 Linderina pennispora 61395 Fungi Fungi 200 7.39e-47   NTclustered gi|2028323356|ref|XM_040888071.1| 61395 g36625 i0 81.481 29.7901234567901 243 45 100 0 1 243 1297 1539 Linderina pennispora P-loop containing nucleoside triphosphate hydrolase protein (DL89DRAFT_268891), mRNA blastn 7239 200 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
9378004 9378004 PRJNA489308_P_NODE_28108_length_258_cov_1.659459_g28032_i0 PRJNA489308 28108 258 1.659459 4.28140422 Linderina pennispora 61395 Fungi Fungi 152 2.2499999999999995e-32   NTclustered gi|2028316138|ref|XM_040886821.1| 61395 g28032 i0 80.288 2.11240310077519 208 35 79 5 1 205 620 416 Linderina pennispora ribosomal protein L18ae (DL89DRAFT_265780), mRNA blastn 545 152 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
17675758 17675758 PRJNA489308_P_NODE_33034_length_248_cov_0.880000_g32958_i0 PRJNA489308 33034 248 0.88 2.1824 Fungi 4751 Fungi Fungi 180 9.859999999999999e-41   NTclustered gi|2028323590|ref|XM_040885143.1| 61395 g32958 i0 81.385 61.1693548387097 231 34 91 8 6 230 734 507 Linderina pennispora putative 60s ribosomal protein l7 (DL89DRAFT_248191), partial mRNA blastn 15170 180 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
20851742 20851742 PRJNA489308_P_NODE_15137_length_312_cov_3.598326_g15061_i0 PRJNA489308 15137 312 3.598326 11.22677712 Kickxella alabastrina 61397 Fungi Fungi 145 4.68e-30   NTclustered gi|2323999380|ref|XM_051537724.1| 61397 g15061 i0 79.167 64.5384615384615 216 39 68 5 3 215 302 90 Kickxella alabastrina ribosomal L18ae/LX protein domain-containing protein (BX661DRAFT_192667), partial mRNA blastn 20136 145 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina
22775104 22775104 PRJNA489308_P_NODE_17538_length_298_cov_2.053333_g17462_i0 PRJNA489308 17538 298 2.053333 6.11893234 Eukaryota 2759 Fungi Fungi 219 2.58e-52   NTclustered gi|2028317442|ref|XM_040885438.1| 61395 g17462 i0 82.54 68.0536912751678 252 40 84 4 47 296 17 266 Linderina pennispora L30e-like protein (DL89DRAFT_256368), partial mRNA blastn 20280 219 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;