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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA489308" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 10 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA489308 · 10 ✖

analysis 1

  • blastn · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1724949 1724949 PRJNA489308_P_NODE_32782_length_248_cov_1.760000_g32706_i0 PRJNA489308 32782 248 1.76 4.3648 Schistosoma haematobium 6185 Platyhelminthes Platyhelminthes 115 2.82e-21   NTclustered gi|2318753592|ref|XM_051218857.1| 6185 g32706 i0 82.443 2.06854838709677 131 23 53 0 18 148 137 7 Schistosoma haematobium Ras- protein Rab-2A, variant 2 (RAB2A_1), mRNA blastn 513 115 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma haematobium
3000917 3000917 PRJNA489308_P_NODE_23243_length_274_cov_1.532338_g23167_i0 PRJNA489308 23243 274 1.532338 4.19860612 Dicrocoelium dendriticum 57078 Platyhelminthes Platyhelminthes 52.8 0.025   NTclustered gi|687572767|emb|LK586392.1| 57078 g23167 i0 100 0.102189781021898 28 0 10 0 52 79 310 337 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_scaffold0178600 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
3649224 3649224 PRJNA489308_P_NODE_3923_length_515_cov_3.004525_g3847_i0 PRJNA489308 3923 515 3.004525 15.47330375 Metazoa 33208 Platyhelminthes Platyhelminthes 56.5 0.004   NTclustered gi|2318769140|ref|XM_051208202.1| 6185 g3847 i0 92.5 0.351456310679612 40 2 8 1 278 316 8590 8629 Schistosoma haematobium plexin b1 (PLXNB3), mRNA blastn 181 56.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma haematobium
9377921 9377921 PRJNA489308_P_NODE_1688_length_724_cov_5.276498_g1614_i0 PRJNA489308 1688 724 5.276498 38.20184552 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 54.7 0.02   NTclustered gi|687166736|emb|LN056594.1| 99802 g1614 i0 96.875 0.0441988950276243 32 1 4 0 291 322 2728 2759 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0054930 blastn 32 54.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
13204006 13204006 PRJNA489308_P_NODE_5831_length_439_cov_27.721311_g5755_i0 PRJNA489308 5831 439 27.721311 121.69655529 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 730 0   NTclustered gi|68479954|gb|DQ076149.1| 6182 g5755 i0 96.804 0.997722095671982 438 13 99 1 2 439 449 13 Schistosoma japonicum clone 1XA1 unknown mRNA blastn 438 730 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
13851746 13851746 PRJNA489308_P_NODE_3131_length_562_cov_5.748466_g3055_i0 PRJNA489308 3131 562 5.748466 32.30637892 Opisthokonta 33154 Platyhelminthes Platyhelminthes 54.7 0.015   NTclustered gi|1084294672|ref|XM_018796201.1| 6183 g3055 i0 100 0.108540925266904 29 0 5 0 286 314 1200 1172 Schistosoma mansoni putative serine-rich repeat protein partial mRNA blastn 61 54.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
19576048 19576048 PRJNA489308_P_NODE_35936_length_244_cov_1.801170_g35860_i0 PRJNA489308 35936 244 1.80117 4.3948548 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 311 3.29e-80   NTclustered gi|68479954|gb|DQ076149.1| 6182 g35860 i0 89.712 0.995901639344262 243 25 99 0 2 244 259 17 Schistosoma japonicum clone 1XA1 unknown mRNA blastn 243 311 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
20851759 20851759 PRJNA489308_P_NODE_16977_length_301_cov_2.026316_g16901_i0 PRJNA489308 16977 301 2.026316 6.09921116 Stenostomum brevipharyngium 2880247 Platyhelminthes Platyhelminthes 56.5 0.002   NTclustered gi|2569237561|gb|OR036964.1| 2880247 g16901 i0 86.538 0.471760797342193 52 6 17 1 150 201 600 550 Stenostomum brevipharyngium EmxB mRNA, complete cds blastn 142 56.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum brevipharyngium
22126744 22126744 PRJNA489308_P_NODE_4758_length_477_cov_3.757426_g4682_i0 PRJNA489308 4758 477 3.757426 17.92292202 Echinococcus granulosus 6210 Platyhelminthes Platyhelminthes 52.8 0.046   NTclustered gi|1373862610|ref|XM_024497682.1| 6210 g4682 i0 100 0.0587002096436059 28 0 6 0 440 467 782 809 Echinococcus granulosus hypothetical protein (EGR_08433), partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Echinococcus Echinococcus granulosus
22126745 22126745 PRJNA489308_P_NODE_4778_length_477_cov_1.727723_g4702_i0 PRJNA489308 4778 477 1.727723 8.24123871 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 56.5 0.004   NTclustered gi|690651554|emb|LN199479.1| 99802 g4702 i0 100 2.82389937106918 30 0 6 0 55 84 1753 1724 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0170110 blastn 1347 56.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;