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contig_metadata

13 rows where analysis = "blastn", bioproject = "PRJNA489308" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 13 ✖

tax_clade 1

bioproject 1

  • PRJNA489308 · 13 ✖

analysis 1

  • blastn · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4277379 4277379 PRJNA489308_P_NODE_64_length_2102_cov_11.452440_g52_i0 PRJNA489308 64 2102 11.45244 240.7302888 Ripella sp. 805 1217113 Discosea other_Eukaryota 1764 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g52 i0 94.627 55.0989533777355 1154 37 55 14 1 1151 1132 1 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 115818 1764 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
5553697 5553697 PRJNA489308_P_NODE_19245_length_290_cov_1.944700_g19169_i0 PRJNA489308 19245 290 1.9447 5.63963 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 148 3.33e-31   NTclustered gi|470521480|ref|XM_004353671.1| 1257118 g19169 i0 80 7.03793103448276 200 40 69 0 1 200 149 348 Acanthamoeba castellanii str. Neff 60S ribosomal protein L27a, putative (ACA1_376690), partial mRNA blastn 2041 148 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
10653881 10653881 PRJNA489308_P_NODE_29049_length_255_cov_1.972527_g28973_i0 PRJNA489308 29049 255 1.972527 5.02994385 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 244 3.56e-60   NTclustered gi|470439766|ref|XM_004339180.1| 1257118 g28973 i0 84.047 9.6156862745098 257 38 100 3 1 255 1176 921 Acanthamoeba castellanii str. Neff Inositol3-phosphate synthase (ACA1_058810), partial mRNA blastn 2452 244 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
10653895 10653895 PRJNA489308_P_NODE_31129_length_250_cov_2.774011_g31053_i0 PRJNA489308 31129 250 2.774011 6.9350275 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 122 1.7e-23   NTclustered gi|470509757|ref|XM_004367695.1| 1257118 g31053 i0 77.99 20.948 209 37 81 5 48 250 1061 856 Acanthamoeba castellanii str. Neff tubulin beta1 chain, putative (ACA1_080680), partial mRNA blastn 5237 122 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
10653934 10653934 PRJNA489308_P_NODE_36429_length_244_cov_0.900585_g36353_i0 PRJNA489308 36429 244 0.900585 2.1974274 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 99 2.79e-16   NTclustered gi|470460327|ref|XM_004341401.1| 1257118 g36353 i0 77.326 0.704918032786885 172 35 70 4 13 182 565 734 Acanthamoeba castellanii str. Neff uncharacterized protein (ACA1_265890), partial mRNA blastn 172 99 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
11928839 11928839 PRJNA489308_P_NODE_25450_length_266_cov_1.943005_g25374_i0 PRJNA489308 25450 266 1.943005 5.1683933 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 257 4.8e-64   NTclustered gi|470447963|ref|XM_004340066.1| 1257118 g25374 i0 84.615 63 260 38 97 2 1 259 1185 1443 Acanthamoeba castellanii str. Neff ATP synthase, putative (ACA1_367940), partial mRNA blastn 16758 257 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
13203807 13203807 PRJNA489308_P_NODE_21571_length_280_cov_2.545894_g21495_i0 PRJNA489308 21571 280 2.545894 7.1285032 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 87.9 7.07e-13   NTclustered gi|470519749|ref|XM_004353447.1| 1257118 g21495 i0 86.585 0.292857142857143 82 7 29 4 23 103 1 79 Acanthamoeba castellanii str. Neff ribosomal L29e protein family (ACA1_143310), partial mRNA blastn 82 87.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
15126104 15126104 PRJNA489308_P_NODE_3812_length_521_cov_6.841518_g3736_i0 PRJNA489308 3812 521 6.841518 35.64430878 Vannellidae 95227 Discosea other_Eukaryota 776 0   NTclustered gi|62865947|gb|AY929922.1| 325065 g3736 i0 93.905 100.955854126679 525 14 100 14 1 521 1671 1161 Platyamoeba sp. strain CAZ7/I 18S small subunit ribosomal RNA gene, partial sequence blastn 52598 776 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba sp. strain CAZ7/I
15752733 15752733 PRJNA489308_P_NODE_113_length_1765_cov_13.747045_g52_i1 PRJNA489308 113 1765 13.747045 242.63534425 Ripella sp. 805 1217113 Discosea other_Eukaryota 1764 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g52 i1 94.627 65.6192634560906 1154 37 65 14 615 1765 1 1132 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 115818 1764 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
18301857 18301857 PRJNA489308_P_NODE_3435_length_542_cov_6.739872_g3359_i0 PRJNA489308 3435 542 6.739872 36.53010624 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 237 1.37e-57   NTclustered gi|470529917|ref|XM_004368096.1| 1257118 g3359 i0 80.795 55.6051660516605 302 58 56 0 139 440 121 422 Acanthamoeba castellanii str. Neff ribosomal protein S17, putative (ACA1_292890), partial mRNA blastn 30138 237 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
19575997 19575997 PRJNA489308_P_NODE_2936_length_578_cov_9.346535_g2860_i0 PRJNA489308 2936 578 9.346535 54.0229723 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 279 2.4e-70   NTclustered gi|470441552|ref|XM_004339378.1| 1257118 g2860 i0 78.251 50.2352941176471 446 89 76 7 91 532 607 166 Acanthamoeba castellanii str. Neff ribosomal protein L10, putative (ACA1_061530), partial mRNA blastn 29036 279 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
20851721 20851721 PRJNA489308_P_NODE_1297_length_803_cov_5.015068_g1230_i0 PRJNA489308 1297 803 5.015068 40.27099604 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 516 2.38e-141   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g1230 i0 80.769 52.4196762141968 676 117 84 9 131 801 2520 1853 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 42093 516 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
23402394 23402394 PRJNA489308_P_NODE_1679_length_725_cov_6.911043_g1605_i0 PRJNA489308 1679 725 6.911043 50.10506175 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 344 1.07e-89   NTclustered gi|470441552|ref|XM_004339378.1| 1257118 g1605 i0 79.31 63.8275862068966 522 85 70 18 48 558 13 522 Acanthamoeba castellanii str. Neff ribosomal protein L10, putative (ACA1_061530), partial mRNA blastn 46275 344 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;