RNAquarium Metadata Server
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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA489308" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 11 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA489308 · 11 ✖

analysis 1

  • blastn · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
450446 450446 PRJNA489308_P_NODE_8721_length_374_cov_1.588040_g8645_i0 PRJNA489308 8721 374 1.58804 5.9392696 Pocillopora verrucosa 203993 Cnidaria other_Eukaryota 76.8 2.11e-9   NTclustered gi|2751567169|ref|XM_059095442.2| 203993 g8645 i0 84.81 12.2112299465241 79 9 21 2 120 198 646 571 PREDICTED: Pocillopora verrucosa uncharacterized protein (LOC131778950), transcript variant X7, mRNA blastn 4567 76.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Pocillopora Pocillopora verrucosa
1725055 1725055 PRJNA489308_P_NODE_6922_length_409_cov_2.940476_g6846_i0 PRJNA489308 6922 409 2.940476 12.02654684 Anemonia sulcata 6108 Cnidaria other_Eukaryota 56.5 0.003   NTclustered gi|2917940766|emb|OZ237573.1| 6108 g6846 i0 100 0.735941320293399 30 0 7 0 261 290 11609381 11609410 Anemonia sulcata genome assembly, chromosome: 19 blastn 301 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
7476120 7476120 PRJNA489308_P_NODE_9126_length_368_cov_1.525424_g9050_i0 PRJNA489308 9126 368 1.525424 5.61356032 Pocilloporidae 46729 Cnidaria other_Eukaryota 104 9.52e-18   NTclustered gi|157144281|ref|NC_009797.1| 46731 g9050 i0 92.958 9.22282608695652 71 5 19 0 270 340 619 549 Pocillopora damicornis mitochondrion, complete genome blastn 3394 104 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Pocillopora Pocillopora damicornis
13203756 13203756 PRJNA489308_P_NODE_1631_length_733_cov_6.156061_g1559_i0 PRJNA489308 1631 733 6.156061 45.12392713 Parvicapsula minibicornis 109801 Cnidaria other_Eukaryota 141 1.52e-28   NTclustered gi|605060084|gb|KF874224.1| 109801 g1559 i0 87.2 17.6712141882674 125 14 17 2 1 125 355 233 Parvicapsula minibicornis 28S ribosomal RNA gene, partial sequence blastn 12953 141 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Parvicapsulidae Parvicapsula Parvicapsula minibicornis
13851754 13851754 PRJNA489308_P_NODE_35151_length_245_cov_1.790698_g35075_i0 PRJNA489308 35151 245 1.790698 4.3872101 Montipora 46703 Cnidaria other_Eukaryota 204 5.77e-48   NTclustered gi|2812121004|ref|XM_068873443.1| 246305 g35075 i0 81.893 46.065306122449 243 42 99 2 2 243 504 263 PREDICTED: Montipora capricornis ras-related protein Rab-1A (LOC138026211), mRNA blastn 11286 204 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Montipora Montipora capricornis
14478836 14478836 PRJNA489308_P_NODE_36552_length_244_cov_0.900585_g36476_i0 PRJNA489308 36552 244 0.900585 2.1974274 Anemonia sulcata 6108 Cnidaria other_Eukaryota 56.5 0.002   NTclustered gi|2917940703|emb|OZ237559.1| 6108 g36476 i0 96.97 6.85245901639344 33 1 14 0 208 240 11119641 11119609 Anemonia sulcata genome assembly, chromosome: 5 blastn 1672 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
14478915 14478915 PRJNA489308_P_NODE_6832_length_411_cov_1.810651_g6756_i0 PRJNA489308 6832 411 1.810651 7.44177561 Rhopilema esculentum 499914 Cnidaria other_Eukaryota 60.2 2.36e-4   NTclustered gi|2729086879|ref|XM_065206019.1| 499914 g6756 i0 94.872 0.326034063260341 39 0 9 1 187 223 682 720 PREDICTED: Rhopilema esculentum uncharacterized LOC135688949 (LOC135688949), transcript variant X1, mRNA blastn 134 60.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Rhizostomatidae Rhopilema Rhopilema esculentum
18301928 18301928 PRJNA489308_P_NODE_6035_length_433_cov_3.077778_g5959_i0 PRJNA489308 6035 433 3.077778 13.32677874 Hydractinia symbiolongicarpus 13093 Cnidaria other_Eukaryota 281 4.900000000000001e-71   NTclustered gi|2518991437|ref|XM_057446583.1| 13093 g5959 i0 82.006 77.9145496535797 339 53 77 7 2 336 177 511 PREDICTED: Hydractinia symbiolongicarpus ubiquitin-60S ribosomal protein L40 (LOC130636750), mRNA blastn 33737 281 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
19575947 19575947 PRJNA489308_P_NODE_2336_length_635_cov_2.893238_g2261_i0 PRJNA489308 2336 635 2.893238 18.3720613 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 187 1.66e-42   NTclustered gi|2782929037|ref|XM_067073665.1| 252671 g2261 i0 79.412 3.96220472440945 272 50 42 5 1 269 895 1163 PREDICTED: Clytia hemisphaerica calreticulin-like (LOC136817322), mRNA blastn 2516 187 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
23402345 23402345 PRJNA489308_P_NODE_10899_length_346_cov_1.842491_g10823_i0 PRJNA489308 10899 346 1.842491 6.37501886 Eunicella cavolini 317547 Cnidaria other_Eukaryota 56.5 0.003   NTclustered gi|2918369553|emb|OZ237725.1| 317547 g10823 i0 96.97 0.179190751445087 33 1 10 0 25 57 15227518 15227486 Eunicella cavolini genome assembly, chromosome: 9 blastn 62 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Eunicellidae Eunicella Eunicella cavolini
24676324 24676324 PRJNA489308_P_NODE_4560_length_485_cov_2.633495_g4484_i0 PRJNA489308 4560 485 2.633495 12.77245075 Galaxea fascicularis 46745 Cnidaria other_Eukaryota 315 5.459999999999999e-81   NTclustered gi|26522783|dbj|AB086826.1| 46745 g4484 i0 78.615 101.358762886598 491 93 100 11 1 485 1164 680 Galaxea fascicularis LGfact mRNA for actin, complete cds blastn 49159 315 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Euphylliidae Galaxea Galaxea fascicularis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;