contig_metadata
21 rows where analysis = "blastn", bioproject = "PRJNA489308" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 450291 | 450291 | PRJNA489308_P_NODE_28121_length_258_cov_1.637838_g28045_i0 | PRJNA489308 | 28121 | 258 | 1.637838 | 4.22562204 | Parvimonas micra | 33033 | Bacteria | Bacteria | 416 | 7.229999999999998e-112 | NTclustered | gi|2702638792|gb|CP148048.1| | 33033 | g28045 | i0 | 95.753 | 274.476744186047 | 259 | 10 | 100 | 1 | 1 | 258 | 311261 | 311003 | Parvimonas micra strain JM503A chromosome, complete genome | blastn | 70815 | 416 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Parvimonas | Parvimonas micra | ||
| 1098118 | 1098118 | PRJNA489308_P_NODE_39961_length_233_cov_2.912500_g39885_i0 | PRJNA489308 | 39961 | 233 | 2.9125 | 6.786125 | Staphylococcus | 1279 | Bacteria | Bacteria | 425 | 1.07e-114 | NTclustered | gi|1250045397|gb|CP017463.1| | 45972 | g39885 | i0 | 99.571 | 477.957081545064 | 233 | 1 | 100 | 0 | 1 | 233 | 730199 | 730431 | Staphylococcus pasteuri strain JS7 chromosome, complete genome | blastn | 111364 | 425 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus pasteuri | ||
| 2373573 | 2373573 | PRJNA489308_P_NODE_18402_length_294_cov_1.597285_g18326_i0 | PRJNA489308 | 18402 | 294 | 1.597285 | 4.6960179 | Staphylococcus | 1279 | Bacteria | Bacteria | 512 | 1.04e-140 | NTclustered | gi|46370575|gb|AY538683.1| | 269290 | g18326 | i0 | 97.959 | 109.955782312925 | 294 | 6 | 100 | 0 | 1 | 294 | 322 | 29 | Staphylococcus sp. Smarlab 3301073 16S ribosomal RNA gene, partial sequence | blastn | 32327 | 516 | 0.992248062015504 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus sp. Smarlab 3301073 | ||
| 3000964 | 3000964 | PRJNA489308_P_NODE_28883_length_256_cov_1.415301_g28807_i0 | PRJNA489308 | 28883 | 256 | 1.415301 | 3.62317056 | Gemella haemolysans | 1379 | Bacteria | Bacteria | 462 | 9.07e-126 | NTclustered | gi|1540173839|emb|LR134484.1| | 1379 | g28807 | i0 | 99.219 | 426.21484375 | 256 | 2 | 100 | 0 | 1 | 256 | 11006 | 10751 | Gemella haemolysans strain NCTC10459 genome assembly, chromosome: 1 | blastn | 109111 | 462 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Gemellaceae | Gemella | Gemella haemolysans | ||
| 3000991 | 3000991 | PRJNA489308_P_NODE_32303_length_249_cov_0.875000_g32227_i0 | PRJNA489308 | 32303 | 249 | 0.875 | 2.17875 | Lactobacillus acetotolerans | 1600 | Bacteria | Bacteria | 52.8 | 0.023 | NTclustered | gi|1782776542|gb|CP046528.1| | 1600 | g32227 | i0 | 100 | 0.112449799196787 | 28 | 0 | 11 | 0 | 205 | 232 | 373782 | 373809 | Lactobacillus acetotolerans strain CN247 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus acetotolerans | ||
| 4277270 | 4277270 | PRJNA489308_P_NODE_32324_length_249_cov_0.875000_g32248_i0 | PRJNA489308 | 32324 | 249 | 0.875 | 2.17875 | Solobacterium moorei | 102148 | Bacteria | Bacteria | 449 | 6.840000000000001e-122 | NTclustered | gi|2589153872|dbj|AP028934.1| | 102148 | g32248 | i0 | 99.197 | 1 | 249 | 2 | 100 | 0 | 1 | 249 | 1512423 | 1512175 | Solobacterium moorei JCM 10645 DNA, complete genome | blastn | 249 | 449 | 1 | Bacteria | Bacillati | Bacillota | Erysipelotrichia | Erysipelotrichales | Erysipelotrichaceae | Solobacterium | Solobacterium moorei | ||
| 4926217 | 4926217 | PRJNA489308_P_NODE_16944_length_301_cov_3.109649_g16868_i0 | PRJNA489308 | 16944 | 301 | 3.109649 | 9.36004349 | Paenibacillus | 44249 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|1373996327|gb|CP028366.1| | 59843 | g16868 | i0 | 100 | 0.770764119601329 | 30 | 0 | 10 | 0 | 155 | 184 | 6305051 | 6305080 | Paenibacillus glucanolyticus strain W10507 chromosome | blastn | 232 | 56.5 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus glucanolyticus | ||
| 8103406 | 8103406 | PRJNA489308_P_NODE_38847_length_241_cov_0.916667_g38771_i0 | PRJNA489308 | 38847 | 241 | 0.916667 | 2.20916747 | Thermoanaerobacterium sp. RBIITD | 1550240 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|1239558912|emb|LT906662.1| | 1550240 | g38771 | i0 | 100 | 0.12448132780083 | 30 | 0 | 12 | 0 | 44 | 73 | 1175289 | 1175260 | Thermoanaerobacterium sp. RBIITD genome assembly, chromosome: I | blastn | 30 | 56.5 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Thermoanaerobacterales | Thermoanaerobacteraceae | Thermoanaerobacterium | Thermoanaerobacterium sp. RBIITD | ||
| 10654026 | 10654026 | PRJNA489308_P_NODE_7569_length_395_cov_1.745342_g7493_i0 | PRJNA489308 | 7569 | 395 | 1.745342 | 6.8941009 | Oceanobacillus sp. FSL K6-3682 | 2921503 | Bacteria | Bacteria | 52.8 | 0.038 | NTclustered | gi|2709943379|gb|CP150263.1| | 2921503 | g7493 | i0 | 100 | 0.0708860759493671 | 28 | 0 | 7 | 0 | 64 | 91 | 3450803 | 3450776 | Oceanobacillus sp. FSL K6-3682 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Oceanobacillus | Oceanobacillus sp. FSL K6-3682 | ||
| 12577085 | 12577085 | PRJNA489308_P_NODE_27330_length_260_cov_2.058824_g27254_i0 | PRJNA489308 | 27330 | 260 | 2.058824 | 5.3529424 | Latilactobacillus | 2767885 | Bacteria | Bacteria | 481 | 2.55e-131 | NTclustered | gi|2254143037|gb|CP017273.1| | 1599 | g27254 | i0 | 100 | 582.388461538462 | 260 | 0 | 100 | 0 | 1 | 260 | 1430447 | 1430706 | Latilactobacillus sakei strain TMW 1.1396 chromosome, complete genome | blastn | 151421 | 481 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Latilactobacillus | Latilactobacillus sakei | ||
| 12577088 | 12577088 | PRJNA489308_P_NODE_35430_length_245_cov_0.895349_g35354_i0 | PRJNA489308 | 35430 | 245 | 0.895349 | 2.19360505 | root | 1 | Root_unresolved | Root_unresolved | 71.3 | 6.11e-8 | NTclustered | gi|2049754127|gb|CP036116.1| | 1405 | g35354 | i0 | 95.455 | 19.1918367346939 | 44 | 2 | 18 | 0 | 79 | 122 | 74377 | 74420 | Bacillus mycoides strain JAS481 plasmid p124 | blastn | 4702 | 71.3 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus mycoides | ||
| 13203754 | 13203754 | PRJNA489308_P_NODE_16171_length_306_cov_1.622318_g16095_i0 | PRJNA489308 | 16171 | 306 | 1.622318 | 4.96429308 | Metasolibacillus sp. FSL K6-0083 | 2921416 | Bacteria | Bacteria | 106 | 2.16e-18 | NTclustered | gi|2723706368|gb|CP152046.1| | 2921416 | g16095 | i0 | 75.325 | 0.754901960784314 | 231 | 51 | 75 | 6 | 64 | 291 | 1889978 | 1890205 | Metasolibacillus sp. FSL K6-0083 chromosome, complete genome | blastn | 231 | 106 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Caryophanaceae | Metasolibacillus | Metasolibacillus sp. FSL K6-0083 | ||
| 14478830 | 14478830 | PRJNA489308_P_NODE_35712_length_245_cov_0.895349_g35636_i0 | PRJNA489308 | 35712 | 245 | 0.895349 | 2.19360505 | Staphylococcus pettenkoferi | 170573 | Bacteria | Bacteria | 436 | 5.229999999999999e-118 | NTclustered | gi|1352851708|gb|CP022096.2| | 170573 | g35636 | i0 | 98.776 | 2.98367346938775 | 245 | 3 | 100 | 0 | 1 | 245 | 2066063 | 2066307 | Staphylococcus pettenkoferi strain FDAARGOS_288 chromosome, complete genome | blastn | 731 | 436 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus pettenkoferi | ||
| 16400649 | 16400649 | PRJNA489308_P_NODE_34033_length_247_cov_0.885057_g33957_i0 | PRJNA489308 | 34033 | 247 | 0.885057 | 2.18609079 | Staphylococcus | 1279 | Bacteria | Bacteria | 457 | 4.05e-124 | NTclustered | gi|1958228241|gb|CP068069.1| | 246432 | g33957 | i0 | 100 | 51.3724696356275 | 247 | 0 | 100 | 0 | 1 | 247 | 928700 | 928946 | Staphylococcus equorum strain FDAARGOS_1149 chromosome, complete genome | blastn | 12689 | 457 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus equorum | ||
| 16400650 | 16400650 | PRJNA489308_P_NODE_35053_length_245_cov_2.395349_g34977_i0 | PRJNA489308 | 35053 | 245 | 2.395349 | 5.86860505 | Streptococcus | 1301 | Bacteria | Bacteria | 453 | 5.1900000000000006e-123 | NTclustered | gi|2182940285|gb|OM368584.1| | 28037 | g34977 | i0 | 100 | 97.4775510204082 | 245 | 0 | 100 | 0 | 1 | 245 | 261 | 17 | Streptococcus mitis strain FC6538 16S ribosomal RNA gene, partial sequence | blastn | 23882 | 453 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus mitis | ||
| 16400655 | 16400655 | PRJNA489308_P_NODE_37753_length_242_cov_1.349112_g37677_i0 | PRJNA489308 | 37753 | 242 | 1.349112 | 3.26485104 | Clostridium | 1485 | Bacteria | Bacteria | 62.1 | 3.62e-5 | NTclustered | gi|1944079066|gb|CP063822.1| | 1491 | g37677 | i0 | 88.235 | 1.75206611570248 | 51 | 6 | 21 | 0 | 154 | 204 | 2140388 | 2140438 | Clostridium botulinum strain 1873 chromosome, complete genome | blastn | 424 | 62.1 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium botulinum | ||
| 18301814 | 18301814 | PRJNA489308_P_NODE_28235_length_258_cov_1.210811_g28159_i0 | PRJNA489308 | 28235 | 258 | 1.210811 | 3.12389238 | Neobacillus sp. 114 | 3048535 | Bacteria | Bacteria | 60.2 | 1.4e-4 | NTclustered | gi|2511738003|gb|CP126144.1| | 3048535 | g28159 | i0 | 100 | 0.124031007751938 | 32 | 0 | 12 | 0 | 169 | 200 | 5125867 | 5125836 | Neobacillus sp. 114 chromosome, complete genome | blastn | 32 | 60.2 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Neobacillus | Neobacillus sp. 114 | ||
| 18301855 | 18301855 | PRJNA489308_P_NODE_34015_length_247_cov_0.885057_g33939_i0 | PRJNA489308 | 34015 | 247 | 0.885057 | 2.18609079 | Aeribacillus sp. FSL k6-2211 | 2954608 | Bacteria | Bacteria | 451 | 1.88e-122 | NTclustered | gi|2709550449|gb|CP150190.1| | 2954608 | g33939 | i0 | 99.595 | 8 | 247 | 1 | 100 | 0 | 1 | 247 | 1903522 | 1903768 | Aeribacillus sp. FSL k6-2211 chromosome, complete genome | blastn | 1976 | 451 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Aeribacillus | Aeribacillus sp. FSL k6-2211 | ||
| 19575909 | 19575909 | PRJNA489308_P_NODE_18256_length_295_cov_1.387387_g18180_i0 | PRJNA489308 | 18256 | 295 | 1.387387 | 4.09279165 | Priestia koreensis | 284581 | Bacteria | Bacteria | 52.8 | 0.027 | NTclustered | gi|2210150307|gb|CP061868.1| | 284581 | g18180 | i0 | 100 | 0.0949152542372881 | 28 | 0 | 9 | 0 | 218 | 245 | 2335808 | 2335835 | Priestia koreensis strain FS-1 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Priestia | Priestia koreensis | ||
| 20851753 | 20851753 | PRJNA489308_P_NODE_16117_length_306_cov_2.248927_g16041_i0 | PRJNA489308 | 16117 | 306 | 2.248927 | 6.88171662 | Parvimonas micra | 33033 | Bacteria | Bacteria | 549 | 8.3e-152 | NTclustered | gi|2418010290|gb|CP101408.1| | 33033 | g16041 | i0 | 99.02 | 373.558823529412 | 306 | 3 | 100 | 0 | 1 | 306 | 334660 | 334965 | Parvimonas micra strain PM79KC-AC-2 chromosome, complete genome | blastn | 114309 | 549 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Parvimonas | Parvimonas micra | ||
| 24676052 | 24676052 | PRJNA489308_P_NODE_10640_length_349_cov_1.652174_g10564_i0 | PRJNA489308 | 10640 | 349 | 1.652174 | 5.76608726 | Cytobacillus dafuensis | 1742359 | Bacteria | Bacteria | 195 | 5.1699999999999995e-45 | NTclustered | gi|1722682188|gb|CP042593.1| | 1742359 | g10564 | i0 | 79.636 | 46.2578796561605 | 275 | 52 | 78 | 4 | 1 | 273 | 2075248 | 2074976 | Cytobacillus dafuensis strain FJAT-25496 chromosome, complete genome | blastn | 16144 | 195 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Cytobacillus | Cytobacillus dafuensis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;