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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA489308" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 12 ✖

bioproject 1

  • PRJNA489308 · 12 ✖

analysis 1

  • blastn · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
450412 450412 PRJNA489308_P_NODE_6141_length_430_cov_2.235294_g6065_i0 PRJNA489308 6141 430 2.235294 9.6117642 Monoraphidium neglectum 145388 Plants Plants 63.9 1.92e-5   NTclustered gi|926791232|ref|XM_014048636.1| 145388 g6065 i0 97.297 1.0093023255814 37 1 9 0 391 427 188 152 Monoraphidium neglectum hypothetical protein mRNA blastn 434 63.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
1725000 1725000 PRJNA489308_P_NODE_40002_length_233_cov_2.406250_g39926_i0 PRJNA489308 40002 233 2.40625 5.6065625 Chlorella variabilis 554065 Plants Plants 215 2.51e-51   NTclustered gi|552843554|ref|XM_005850806.1| 554065 g39926 i0 83.7 26.244635193133 227 37 97 0 7 233 433 207 Chlorella variabilis cytoplasmic ribosomal protein S13 (CHLNCDRAFT_55999) mRNA, complete cds blastn 6115 215 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
4926243 4926243 PRJNA489308_P_NODE_4644_length_482_cov_2.652812_g4568_i0 PRJNA489308 4644 482 2.652812 12.78655384 root 1 Root_unresolved Root_unresolved 289 3.29e-73   NTclustered gi|926791444|ref|XM_014048742.1| 145388 g4568 i0 78.604 95.8879668049793 444 89 91 6 32 472 2886 2446 Monoraphidium neglectum adenosylhomocysteinase mRNA blastn 46218 291 0.993127147766323 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
5553797 5553797 PRJNA489308_P_NODE_325_length_1315_cov_3.604670_g291_i0 PRJNA489308 325 1315 3.60467 47.4014105 Monoraphidium neglectum 145388 Plants Plants 861 0   NTclustered gi|926791444|ref|XM_014048742.1| 145388 g291 i0 79.755 92.9437262357415 1225 218 92 26 1 1213 2884 1678 Monoraphidium neglectum adenosylhomocysteinase mRNA blastn 122221 861 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
9377885 9377885 PRJNA489308_P_NODE_11668_length_339_cov_1.157895_g11592_i0 PRJNA489308 11668 339 1.157895 3.92526405 Chlamydomonas incerta 51695 Plants Plants 250 1.06e-61   NTclustered gi|74272614|gb|DQ122872.1| 51695 g11592 i0 80.982 76.3097345132743 326 53 96 2 11 336 770 454 Chlamydomonas incerta mitochondrial ADP/ATP translocator (ANT) mRNA, complete cds; nuclear gene for mitochondrial product blastn 25869 250 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas incerta
10026401 10026401 PRJNA489308_P_NODE_28328_length_257_cov_2.304348_g28252_i0 PRJNA489308 28328 257 2.304348 5.92217436 Chlorellales 35460 Plants Plants 150 8.06e-32   NTclustered gi|9188542|dbj|AB036814.1| 3077 g28252 i0 88.372 39.6381322957198 129 9 50 4 7 135 328 450 Chlorella vulgaris tubA mRNA for alpha-tubulin, partial cds blastn 10187 150 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris
10653817 10653817 PRJNA489308_P_NODE_2089_length_664_cov_3.925550_g2014_i0 PRJNA489308 2089 664 3.92555 26.065652 Chlamydomonas reinhardtii 3055 Plants Plants 335 5.859999999999999e-87   NTclustered gi|2082248650|ref|XM_043063418.1| 3055 g2014 i0 77.526 73.3012048192771 574 117 86 11 78 645 857 290 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_06g290950v5), mRNA blastn 48672 335 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
11928752 11928752 PRJNA489308_P_NODE_16570_length_304_cov_1.194805_g16494_i0 PRJNA489308 16570 304 1.194805 3.6322072 Chlamydomonas reinhardtii 3055 Plants Plants 195 4.4499999999999995e-45   NTclustered gi|2082237330|ref|XM_001689650.2| 3055 g16494 i0 79 55.2335526315789 300 51 97 8 11 304 2129 2422 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_01g042750v5), mRNA blastn 16791 195 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
13203996 13203996 PRJNA489308_P_NODE_5291_length_457_cov_6.611979_g5215_i0 PRJNA489308 5291 457 6.611979 30.21674403 Chlamydomonas reinhardtii 3055 Plants Plants 106 3.35e-18   NTclustered gi|2082260798|ref|XM_001697008.2| 3055 g5215 i0 92 1.2144420131291 75 6 16 0 281 355 957 1031 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_12g520500v5), mRNA blastn 555 106 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
15752775 15752775 PRJNA489308_P_NODE_1553_length_749_cov_3.436391_g1482_i0 PRJNA489308 1553 749 3.436391 25.73856859 Monoraphidium neglectum 145388 Plants Plants 231 8.98e-56   NTclustered gi|926795717|ref|XM_014050538.1| 145388 g1482 i0 80.192 20.8504672897196 313 58 42 4 75 385 55 365 Monoraphidium neglectum 40S ribosomal protein S20-1 mRNA blastn 15617 231 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
15753021 15753021 PRJNA489308_P_NODE_9333_length_365_cov_1.544521_g9257_i0 PRJNA489308 9333 365 1.544521 5.63750165 Auxenochlorella pyrenoidosa 3078 Plants Plants 664 0   NTclustered gi|1201359271|gb|MF040793.1| 3078 g9257 i0 99.452 95.345205479452 365 2 100 0 1 365 593 957 Auxenochlorella pyrenoidosa isolate HITH6 18S ribosomal RNA gene, partial sequence blastn 34801 664 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella pyrenoidosa
20851893 20851893 PRJNA489308_P_NODE_34157_length_247_cov_0.885057_g34081_i0 PRJNA489308 34157 247 0.885057 2.18609079 Scherffelia dubia 3190 Plants Plants 211 3.48e-50   NTclustered gi|21208|emb|X69220.1| 3190 g34081 i0 82.186 2.97165991902834 247 42 99 2 1 246 420 175 S.dubia mRNA for caltractin blastn 734 211 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorodendrophyceae Chlorodendrales Chlorodendraceae Scherffelia Scherffelia dubia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;