RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA489308" and tax_clade = "Metamonada"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Metamonada · 5 ✖

bioproject 1

  • PRJNA489308 · 5 ✖

analysis 1

  • blastn · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3000888 3000888 PRJNA489308_P_NODE_20063_length_287_cov_1.014019_g19987_i0 PRJNA489308 20063 287 1.014019 2.91023453 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 52.8 0.027   NTclustered gi|2794955417|ref|XM_067876856.1| 2049356 g19987 i0 100 0.0975609756097561 28 0 10 0 260 287 2249 2276 Monocercomonoides exilis uncharacterized protein (MONOS_6614), partial mRNA blastn 28 52.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
3000935 3000935 PRJNA489308_P_NODE_25683_length_265_cov_2.375000_g25607_i0 PRJNA489308 25683 265 2.375 6.29375 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 62.1 4.02e-5   NTclustered gi|2794941558|ref|XM_067863467.1| 2049356 g25607 i0 97.222 16.2301886792453 36 1 14 0 1 36 2280 2315 Monocercomonoides exilis uncharacterized protein (MONOS_10977), partial mRNA blastn 4301 62.1 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
3001051 3001051 PRJNA489308_P_NODE_39383_length_238_cov_3.975758_g39307_i0 PRJNA489308 39383 238 3.975758 9.46230404 Paratrimastix eleionoma 1709329 Preaxostyla other_Eukaryota 207 4.31e-49   NTclustered gi|2443275794|gb|OP718846.1| 1709329 g39307 i0 82.573 97.3235294117647 241 37 100 5 1 238 623 861 Paratrimastix eleionoma V-type proton ATPase subunit B mRNA, complete cds blastn 23163 207 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix eleionoma
6827718 6827718 PRJNA489308_P_NODE_20806_length_284_cov_1.170616_g20730_i0 PRJNA489308 20806 284 1.170616 3.32454944 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 52.8 0.026   NTclustered gi|2794957104|ref|XM_067880540.1| 2049356 g20730 i0 100 0.0985915492957746 28 0 10 0 164 191 1295 1268 Monocercomonoides exilis uncharacterized protein (MONOS_9991), mRNA blastn 28 52.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
17027341 17027341 PRJNA489308_P_NODE_11134_length_344_cov_1.431734_g11058_i0 PRJNA489308 11134 344 1.431734 4.92516496 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 54.7 0.009   NTclustered gi|2794955305|ref|XM_067874935.1| 2049356 g11058 i0 100 0.0843023255813953 29 0 8 0 211 239 3367 3395 Monocercomonoides exilis uncharacterized protein (MONOS_4836), partial mRNA blastn 29 54.7 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;