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contig_metadata

33 rows where analysis = "blastn", bioproject = "PRJNA489308" and tax_clade = "Amoebozoa"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 33 ✖

bioproject 1

  • PRJNA489308 · 33 ✖

analysis 1

  • blastn · 33 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
450451 450451 PRJNA489308_P_NODE_9681_length_360_cov_3.846690_g9605_i0 PRJNA489308 9681 360 3.84669 13.848084 Entamoeba nuttalli 412467 Evosea other_Eukaryota 196 1.49e-45   NTclustered gi|672810997|ref|XM_008862315.1| 1076696 g9605 i0 80.228 5.66111111111111 263 50 73 2 23 284 7 268 Entamoeba nuttalli P19 ribosomal S17 protein partial mRNA blastn 2038 196 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba nuttalli
1724895 1724895 PRJNA489308_P_NODE_25042_length_268_cov_1.312821_g24966_i0 PRJNA489308 25042 268 1.312821 3.51836028 Heterostelium album 2086695 Evosea other_Eukaryota 147 1.09e-30   NTclustered gi|1160570380|ref|XM_020574684.1| 670386 g24966 i0 82.53 5.35820895522388 166 29 62 0 43 208 487 322 Polysphondylium pallidum PN500 vacuolar ATPase proteolipid subunit (vatP), partial mRNA blastn 1436 147 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
3000907 3000907 PRJNA489308_P_NODE_2203_length_650_cov_2.620451_g2128_i0 PRJNA489308 2203 650 2.620451 17.0329315 Dictyostelium discoideum 44689 Evosea other_Eukaryota 60.2 3.86e-4   NTclustered gi|268637935|ref|XM_635412.3| 352472 g2128 i0 94.737 0.553846153846154 38 2 6 0 291 328 4595 4632 Dictyostelium discoideum AX4 protein kinase, Atypical group (tra1) mRNA, complete cds blastn 360 60.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
4277167 4277167 PRJNA489308_P_NODE_16304_length_305_cov_1.961207_g16228_i0 PRJNA489308 16304 305 1.961207 5.98168135 Dictyostelium purpureum 5786 Evosea other_Eukaryota 220 7.37e-53   NTclustered gi|330822624|ref|XM_003291701.1| 5786 g16228 i0 82.353 23.1213114754098 255 43 83 2 30 283 424 677 Dictyostelium purpureum vacuolar H+ ATPase B subunit (DICPUDRAFT_50012), mRNA blastn 7052 220 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
4277379 4277379 PRJNA489308_P_NODE_64_length_2102_cov_11.452440_g52_i0 PRJNA489308 64 2102 11.45244 240.7302888 Ripella sp. 805 1217113 Discosea other_Eukaryota 1764 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g52 i0 94.627 55.0989533777355 1154 37 55 14 1 1151 1132 1 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 115818 1764 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
5553697 5553697 PRJNA489308_P_NODE_19245_length_290_cov_1.944700_g19169_i0 PRJNA489308 19245 290 1.9447 5.63963 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 148 3.33e-31   NTclustered gi|470521480|ref|XM_004353671.1| 1257118 g19169 i0 80 7.03793103448276 200 40 69 0 1 200 149 348 Acanthamoeba castellanii str. Neff 60S ribosomal protein L27a, putative (ACA1_376690), partial mRNA blastn 2041 148 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
8103413 8103413 PRJNA489308_P_NODE_39867_length_234_cov_2.695652_g39791_i0 PRJNA489308 39867 234 2.695652 6.30782568 Dictyostelium discoideum 44689 Evosea other_Eukaryota 62.1 3.48e-5   NTclustered gi|66827540|ref|XM_642033.1| 352472 g39791 i0 95 2.94444444444444 40 0 17 2 55 93 373 335 Dictyostelium discoideum AX4 SNF2-related domain-containing protein (DDB_G0267556) mRNA, complete cds blastn 689 62.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
10653881 10653881 PRJNA489308_P_NODE_29049_length_255_cov_1.972527_g28973_i0 PRJNA489308 29049 255 1.972527 5.02994385 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 244 3.56e-60   NTclustered gi|470439766|ref|XM_004339180.1| 1257118 g28973 i0 84.047 9.6156862745098 257 38 100 3 1 255 1176 921 Acanthamoeba castellanii str. Neff Inositol3-phosphate synthase (ACA1_058810), partial mRNA blastn 2452 244 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
10653895 10653895 PRJNA489308_P_NODE_31129_length_250_cov_2.774011_g31053_i0 PRJNA489308 31129 250 2.774011 6.9350275 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 122 1.7e-23   NTclustered gi|470509757|ref|XM_004367695.1| 1257118 g31053 i0 77.99 20.948 209 37 81 5 48 250 1061 856 Acanthamoeba castellanii str. Neff tubulin beta1 chain, putative (ACA1_080680), partial mRNA blastn 5237 122 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
10653934 10653934 PRJNA489308_P_NODE_36429_length_244_cov_0.900585_g36353_i0 PRJNA489308 36429 244 0.900585 2.1974274 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 99 2.79e-16   NTclustered gi|470460327|ref|XM_004341401.1| 1257118 g36353 i0 77.326 0.704918032786885 172 35 70 4 13 182 565 734 Acanthamoeba castellanii str. Neff uncharacterized protein (ACA1_265890), partial mRNA blastn 172 99 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
10653972 10653972 PRJNA489308_P_NODE_40689_length_227_cov_3.766234_g40613_i0 PRJNA489308 40689 227 3.766234 8.54935118 Entamoeba nuttalli 412467 Evosea other_Eukaryota 132 2.52e-26   NTclustered gi|672810997|ref|XM_008862315.1| 1076696 g40613 i0 78.325 0.894273127753304 203 44 89 0 6 208 209 7 Entamoeba nuttalli P19 ribosomal S17 protein partial mRNA blastn 203 132 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba nuttalli
11928823 11928823 PRJNA489308_P_NODE_2370_length_632_cov_1.865832_g2295_i0 PRJNA489308 2370 632 1.865832 11.79205824 Acytostelium subglobosum 361139 Evosea other_Eukaryota 67.6 2.24e-6   NTclustered gi|831787218|ref|XM_012902905.1| 1410327 g2295 i0 100 0.973101265822785 36 0 6 0 595 630 587 622 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 615 67.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
11928839 11928839 PRJNA489308_P_NODE_25450_length_266_cov_1.943005_g25374_i0 PRJNA489308 25450 266 1.943005 5.1683933 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 257 4.8e-64   NTclustered gi|470447963|ref|XM_004340066.1| 1257118 g25374 i0 84.615 63 260 38 97 2 1 259 1185 1443 Acanthamoeba castellanii str. Neff ATP synthase, putative (ACA1_367940), partial mRNA blastn 16758 257 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
12577094 12577094 PRJNA489308_P_NODE_3950_length_513_cov_8.052273_g3874_i0 PRJNA489308 3950 513 8.052273 41.30816049 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 586 1.1099999999999997e-162   NTclustered gi|167394534|ref|XM_001740954.1| 370354 g3874 i0 87.403 100.352826510721 516 57 99 5 1 512 524 13 Entamoeba dispar SAW760 actin, putative (EDI_043510), partial mRNA blastn 51481 588 0.996598639455782 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba dispar
13203807 13203807 PRJNA489308_P_NODE_21571_length_280_cov_2.545894_g21495_i0 PRJNA489308 21571 280 2.545894 7.1285032 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 87.9 7.07e-13   NTclustered gi|470519749|ref|XM_004353447.1| 1257118 g21495 i0 86.585 0.292857142857143 82 7 29 4 23 103 1 79 Acanthamoeba castellanii str. Neff ribosomal L29e protein family (ACA1_143310), partial mRNA blastn 82 87.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
13204060 13204060 PRJNA489308_P_NODE_9831_length_358_cov_2.435088_g9755_i0 PRJNA489308 9831 358 2.435088 8.71761504 Acytostelium subglobosum 361139 Evosea other_Eukaryota 193 1.91e-44   NTclustered gi|831757457|ref|XM_012893582.1| 1410327 g9755 i0 84.817 15.4106145251397 191 29 53 0 146 336 861 671 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 5517 193 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
14478621 14478621 PRJNA489308_P_NODE_10452_length_351_cov_1.665468_g10376_i0 PRJNA489308 10452 351 1.665468 5.84579268 Dictyostelium discoideum 44689 Evosea other_Eukaryota 331 3.8e-86   NTclustered gi|66815356|ref|XM_636603.1| 352472 g10376 i0 87.075 73.1680911680912 294 36 83 2 1 293 314 22 Dictyostelium discoideum AX4 hypothetical protein (calA) mRNA, complete cds blastn 25682 331 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
14478650 14478650 PRJNA489308_P_NODE_14052_length_320_cov_1.190283_g13976_i0 PRJNA489308 14052 320 1.190283 3.8089056 Heterostelium album 2086695 Evosea other_Eukaryota 183 1.02e-41   NTclustered gi|1160563236|ref|XM_020579833.1| 670386 g13976 i0 80.932 23.44375 236 41 73 4 86 319 1 234 Polysphondylium pallidum PN500 Rho GTPase (rac1B), partial mRNA blastn 7502 183 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
14478771 14478771 PRJNA489308_P_NODE_26612_length_262_cov_3.603175_g26536_i0 PRJNA489308 26612 262 3.603175 9.4403185 Cavenderia fasciculata 261658 Evosea other_Eukaryota 183 8.119999999999997e-42   NTclustered gi|470237759|ref|XM_004350786.1| 261658 g26536 i0 80.162 94.6412213740458 247 47 94 2 17 262 850 1095 Cavenderia fasciculata actin (DFA_11894), partial mRNA blastn 24796 183 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
15126104 15126104 PRJNA489308_P_NODE_3812_length_521_cov_6.841518_g3736_i0 PRJNA489308 3812 521 6.841518 35.64430878 Vannellidae 95227 Discosea other_Eukaryota 776 0   NTclustered gi|62865947|gb|AY929922.1| 325065 g3736 i0 93.905 100.955854126679 525 14 100 14 1 521 1671 1161 Platyamoeba sp. strain CAZ7/I 18S small subunit ribosomal RNA gene, partial sequence blastn 52598 776 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba sp. strain CAZ7/I
15752733 15752733 PRJNA489308_P_NODE_113_length_1765_cov_13.747045_g52_i1 PRJNA489308 113 1765 13.747045 242.63534425 Ripella sp. 805 1217113 Discosea other_Eukaryota 1764 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g52 i1 94.627 65.6192634560906 1154 37 65 14 615 1765 1 1132 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 115818 1764 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
15752879 15752879 PRJNA489308_P_NODE_29853_length_253_cov_1.555556_g29777_i0 PRJNA489308 29853 253 1.555556 3.93555668 Dictyostelium discoideum 44689 Evosea other_Eukaryota 202 2.15e-47   NTclustered gi|66800080|ref|XM_628964.1| 352472 g29777 i0 81.25 17.802371541502 256 42 100 4 1 253 290 542 Dictyostelium discoideum AX4 proteasome subunit beta type 5 (psmB5) mRNA, complete cds blastn 4504 202 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
17027615 17027615 PRJNA489308_P_NODE_5874_length_438_cov_2.668493_g5798_i0 PRJNA489308 5874 438 2.668493 11.68799934 Acytostelium subglobosum 361139 Evosea other_Eukaryota 145 6.79e-30   NTclustered gi|831788452|ref|XM_012903297.1| 1410327 g5798 i0 75.078 9.72602739726027 321 74 73 5 1 318 1590 1907 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 4260 145 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
18301785 18301785 PRJNA489308_P_NODE_23755_length_272_cov_1.703518_g23679_i0 PRJNA489308 23755 272 1.703518 4.63356896 Dictyostelium purpureum 5786 Evosea other_Eukaryota 204 6.509999999999999e-48   NTclustered gi|330796796|ref|XM_003286403.1| 5786 g23679 i0 81.323 23.9963235294118 257 42 93 6 19 272 393 140 Dictyostelium purpureum ranA, RAN GTPase (ranA), partial mRNA blastn 6527 204 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
18301857 18301857 PRJNA489308_P_NODE_3435_length_542_cov_6.739872_g3359_i0 PRJNA489308 3435 542 6.739872 36.53010624 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 237 1.37e-57   NTclustered gi|470529917|ref|XM_004368096.1| 1257118 g3359 i0 80.795 55.6051660516605 302 58 56 0 139 440 121 422 Acanthamoeba castellanii str. Neff ribosomal protein S17, putative (ACA1_292890), partial mRNA blastn 30138 237 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
18949608 18949608 PRJNA489308_P_NODE_3415_length_544_cov_4.012739_g3339_i0 PRJNA489308 3415 544 4.012739 21.82930016 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 58.4 0.001   NTclustered gi|470245538|ref|XM_004356856.1| 261658 g3339 i0 94.595 3.5625 37 2 7 0 324 360 146 110 Cavenderia fasciculata GRAM domain-containing protein (DFA_06683), partial mRNA blastn 1938 58.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
19575997 19575997 PRJNA489308_P_NODE_2936_length_578_cov_9.346535_g2860_i0 PRJNA489308 2936 578 9.346535 54.0229723 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 279 2.4e-70   NTclustered gi|470441552|ref|XM_004339378.1| 1257118 g2860 i0 78.251 50.2352941176471 446 89 76 7 91 532 607 166 Acanthamoeba castellanii str. Neff ribosomal protein L10, putative (ACA1_061530), partial mRNA blastn 29036 279 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
20851721 20851721 PRJNA489308_P_NODE_1297_length_803_cov_5.015068_g1230_i0 PRJNA489308 1297 803 5.015068 40.27099604 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 516 2.38e-141   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g1230 i0 80.769 52.4196762141968 676 117 84 9 131 801 2520 1853 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 42093 516 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
23402378 23402378 PRJNA489308_P_NODE_15159_length_312_cov_2.276151_g15083_i0 PRJNA489308 15159 312 2.276151 7.10159112 Cavenderia fasciculata 261658 Evosea other_Eukaryota 243 1.61e-59   NTclustered gi|470240647|ref|XM_004354263.1| 261658 g15083 i0 80.707 190.75 311 60 99 0 1 311 386 76 Cavenderia fasciculata ubiquitin (ubqA), partial mRNA blastn 59514 243 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
23402394 23402394 PRJNA489308_P_NODE_1679_length_725_cov_6.911043_g1605_i0 PRJNA489308 1679 725 6.911043 50.10506175 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 344 1.07e-89   NTclustered gi|470441552|ref|XM_004339378.1| 1257118 g1605 i0 79.31 63.8275862068966 522 85 70 18 48 558 13 522 Acanthamoeba castellanii str. Neff ribosomal protein L10, putative (ACA1_061530), partial mRNA blastn 46275 344 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
23402572 23402572 PRJNA489308_P_NODE_4939_length_471_cov_1.354271_g4863_i0 PRJNA489308 4939 471 1.354271 6.37861641 Dictyostelium purpureum 5786 Evosea other_Eukaryota 241 9.11e-59   NTclustered gi|330797305|ref|XM_003286654.1| 5786 g4863 i0 78.261 4.58811040339703 391 73 82 8 13 397 612 228 Dictyostelium purpureum enoyl-CoA hydratase (DICPUDRAFT_54444), partial mRNA blastn 2161 241 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
24050018 24050018 PRJNA489308_P_NODE_7159_length_403_cov_5.090909_g7083_i0 PRJNA489308 7159 403 5.090909 20.51636327 Dictyostelium 5782 Evosea other_Eukaryota 268 3.52e-67   NTclustered gi|167938|gb|M23749.1|DDIUBIQB 44689 g7083 i0 79.894 87.9081885856079 378 67 93 9 29 403 385 14 D.discoideum ubiquitin mRNA, complete cds, clone DCUBV45 blastn 35427 268 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
24676243 24676243 PRJNA489308_P_NODE_31980_length_249_cov_2.204545_g31904_i0 PRJNA489308 31980 249 2.204545 5.48931705 Cavenderia fasciculata 261658 Evosea other_Eukaryota 137 6.0499999999999996e-28   NTclustered gi|470266348|ref|XM_004361672.1| 261658 g31904 i0 81.988 27.0441767068273 161 29 65 0 85 245 322 482 Cavenderia fasciculata Rab GTPase (rab7A), partial mRNA blastn 6734 137 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;