contig_metadata
12 rows where analysis = "blastn", bioproject = "PRJNA488043" and tax_phylum = "Nitrospirota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 450057 | 450057 | PRJNA488043_P_NODE_6781_length_479_cov_2.435556_g4688_i0 | PRJNA488043 | 6781 | 479 | 2.435556 | 11.66631324 | Nitrospira sp. KM1 | 1936990 | Bacteria | Bacteria | 298 | 5.4299999999999997e-76 | NTclustered | gi|1808878785|dbj|AP022671.1| | 1936990 | g4688 | i0 | 86.121 | 17.1711899791232 | 281 | 33 | 86 | 5 | 202 | 479 | 3399332 | 3399055 | Nitrospira sp. KM1 DNA, complete genome | blastn | 8225 | 298 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. KM1 | ||
| 7475927 | 7475927 | PRJNA488043_P_NODE_20626_length_165_cov_4.529412_g18384_i0 | PRJNA488043 | 20626 | 165 | 4.529412 | 7.4735298 | Nitrospira | 1234 | Bacteria | Bacteria | 231 | 1.65e-56 | NTclustered | gi|2290907019|gb|CP060499.1| | 70125 | g18384 | i0 | 93.038 | 82.9757575757576 | 158 | 11 | 96 | 0 | 6 | 163 | 2684490 | 2684647 | MAG: Nitrospira sp. isolate DH1 chromosome, complete genome | blastn | 13691 | 231 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 9377836 | 9377836 | PRJNA488043_P_NODE_9408_length_359_cov_12.272727_g7178_i0 | PRJNA488043 | 9408 | 359 | 12.272727 | 44.05908993 | Nitrospira moscoviensis | 42253 | Bacteria | Bacteria | 514 | 3.61e-141 | NTclustered | gi|922305621|gb|CP011801.1| | 42253 | g7178 | i0 | 92.5 | 162.16991643454 | 360 | 25 | 100 | 2 | 1 | 359 | 1277242 | 1277600 | Nitrospira moscoviensis strain NSP M-1, complete genome | blastn | 58219 | 514 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira moscoviensis | ||
| 14478534 | 14478534 | PRJNA488043_P_NODE_5352_length_568_cov_8.155844_g3405_i0 | PRJNA488043 | 5352 | 568 | 8.155844 | 46.32519392 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 948 | 0 | NTclustered | gi|2863125063|dbj|AP038805.1| | 70125 | g3405 | i0 | 96.147 | 131.140845070423 | 571 | 19 | 100 | 1 | 1 | 568 | 2094551 | 2093981 | MAG: Nitrospira sp. AFB01 DNA, complete genome | blastn | 74488 | 948 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 15752660 | 15752660 | PRJNA488043_P_NODE_6873_length_473_cov_9.315315_g4771_i0 | PRJNA488043 | 6873 | 473 | 9.315315 | 44.06143995 | Nitrospira moscoviensis | 42253 | Bacteria | Bacteria | 488 | 2.9599999999999996e-133 | NTclustered | gi|922305621|gb|CP011801.1| | 42253 | g4771 | i0 | 89.086 | 142.042283298097 | 394 | 41 | 83 | 2 | 81 | 473 | 1277634 | 1277242 | Nitrospira moscoviensis strain NSP M-1, complete genome | blastn | 67186 | 488 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira moscoviensis | ||
| 16400432 | 16400432 | PRJNA488043_P_NODE_13473_length_252_cov_2.636771_g11231_i0 | PRJNA488043 | 13473 | 252 | 2.636771 | 6.64466292 | Nitrospira | 1234 | Bacteria | Bacteria | 294 | 3.44e-75 | NTclustered | gi|2863129529|dbj|AP038806.1| | 70125 | g11231 | i0 | 98.788 | 182.031746031746 | 165 | 2 | 65 | 0 | 1 | 165 | 3066337 | 3066501 | MAG: Nitrospira sp. NFB02 DNA, complete genome | blastn | 45872 | 294 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 17675569 | 17675569 | PRJNA488043_P_NODE_18734_length_184_cov_39.070968_g16492_i0 | PRJNA488043 | 18734 | 184 | 39.070968 | 71.89058112 | Nitrospira | 1234 | Bacteria | Bacteria | 316 | 5.04e-82 | NTclustered | gi|2290907019|gb|CP060499.1| | 70125 | g16492 | i0 | 100 | 92.6684782608696 | 171 | 0 | 93 | 0 | 14 | 184 | 2686944 | 2687114 | MAG: Nitrospira sp. isolate DH1 chromosome, complete genome | blastn | 17051 | 316 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 17675575 | 17675575 | PRJNA488043_P_NODE_19454_length_177_cov_3.675676_g17212_i0 | PRJNA488043 | 19454 | 177 | 3.675676 | 6.50594652 | Nitrospira | 1234 | Bacteria | Bacteria | 230 | 6.439999999999999e-56 | NTclustered | gi|2511640680|gb|CP126121.1| | 70125 | g17212 | i0 | 90.395 | 24.045197740113 | 177 | 14 | 99 | 3 | 1 | 175 | 883572 | 883747 | MAG: Nitrospira sp. isolate bin_001 chromosome, complete genome | blastn | 4256 | 230 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 18949528 | 18949528 | PRJNA488043_P_NODE_7475_length_441_cov_11.781553_g5325_i0 | PRJNA488043 | 7475 | 441 | 11.781553 | 51.95664873 | Nitrospira | 1234 | Bacteria | Bacteria | 671 | 0 | NTclustered | gi|2863129529|dbj|AP038806.1| | 70125 | g5325 | i0 | 94.104 | 128.360544217687 | 441 | 26 | 100 | 0 | 1 | 441 | 3063201 | 3062761 | MAG: Nitrospira sp. NFB02 DNA, complete genome | blastn | 56607 | 671 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 19575552 | 19575552 | PRJNA488043_P_NODE_11996_length_283_cov_1.535433_g9755_i0 | PRJNA488043 | 11996 | 283 | 1.535433 | 4.34527539 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 204 | 6.809999999999998e-48 | NTclustered | gi|2863125063|dbj|AP038805.1| | 70125 | g9755 | i0 | 90.909 | 5.46643109540636 | 154 | 11 | 54 | 3 | 131 | 283 | 732626 | 732475 | MAG: Nitrospira sp. AFB01 DNA, complete genome | blastn | 1547 | 204 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 22126223 | 22126223 | PRJNA488043_P_NODE_10838_length_313_cov_4.232394_g8597_i0 | PRJNA488043 | 10838 | 313 | 4.232394 | 13.24739322 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 538 | 1.8399999999999993e-148 | NTclustered | gi|2511640680|gb|CP126121.1| | 70125 | g8597 | i0 | 97.756 | 17.7635782747604 | 312 | 7 | 99 | 0 | 2 | 313 | 2738163 | 2737852 | MAG: Nitrospira sp. isolate bin_001 chromosome, complete genome | blastn | 5560 | 538 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 23402264 | 23402264 | PRJNA488043_P_NODE_5099_length_589_cov_5.680357_g3186_i0 | PRJNA488043 | 5099 | 589 | 5.680357 | 33.45730273 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 710 | 0 | NTclustered | gi|2290907019|gb|CP060499.1| | 70125 | g3186 | i0 | 96.092 | 382.449915110357 | 435 | 17 | 98 | 0 | 1 | 435 | 2683847 | 2683413 | MAG: Nitrospira sp. isolate DH1 chromosome, complete genome | blastn | 225263 | 710 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;