contig_metadata
11 rows where analysis = "blastn", bioproject = "PRJNA488043" and tax_phylum = "Acidobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 449880 | 449880 | PRJNA488043_P_NODE_13181_length_257_cov_4.640351_g10939_i0 | PRJNA488043 | 13181 | 257 | 4.640351 | 11.92570207 | Bryobacterales bacterium | 2026791 | Bacteria | Bacteria | 207 | 4.71e-49 | NTclustered | gi|2874254061|emb|OY970385.1| | 2026791 | g10939 | i0 | 84.834 | 56.9377431906615 | 211 | 27 | 81 | 5 | 1 | 208 | 2774632 | 2774424 | MAG: Bryobacterales bacterium isolate MFD03726.bin.c.1 genome assembly, chromosome: 1 | blastn | 14633 | 207 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacterales bacterium | ||||
| 1724760 | 1724760 | PRJNA488043_S_NODE_582_length_243_cov_17.392523_g571_i0 | PRJNA488043 | 582 | 243 | 17.392523 | 42.26383089 | Thermotomaculum hydrothermale | 981385 | Bacteria | Bacteria | 154 | 5.84e-33 | NTclustered | gi|1941646770|dbj|AP017470.1| | 981385 | g571 | i0 | 90.678 | 249.201646090535 | 118 | 8 | 48 | 3 | 13 | 128 | 1258460 | 1258576 | Thermotomaculum hydrothermale DNA, complete genome, strain: AC55 | blastn | 60556 | 154 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Holophagae | Thermotomaculales | Thermotomaculaceae | Thermotomaculum | Thermotomaculum hydrothermale | ||
| 3649179 | 3649179 | PRJNA488043_S_NODE_183_length_389_cov_19.513889_g172_i0 | PRJNA488043 | 183 | 389 | 19.513889 | 75.90902821 | Bacteria | 2 | Bacteria | Bacteria | 296 | 1.56e-75 | NTclustered | gi|2621704223|emb|OY761614.1| | 188475 | g172 | i0 | 81.316 | 276.825192802057 | 380 | 58 | 96 | 12 | 1 | 372 | 644041 | 643667 | MAG: uncultured Holophaga sp. isolate c3c763bb-72ba-4188-aae9-c4b83244ba6d genome assembly, chromosome: 1 | blastn | 107685 | 296 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Holophagae | Holophagales | Holophagaceae | Holophaga | uncultured Holophaga sp. | ||
| 4276924 | 4276924 | PRJNA488043_P_NODE_18104_length_190_cov_18.049689_g15862_i0 | PRJNA488043 | 18104 | 190 | 18.049689 | 34.2944091 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 189 | 1.19e-43 | NTclustered | gi|1958098837|gb|CP065005.1| | 1978231 | g15862 | i0 | 96.491 | 154.731578947368 | 114 | 4 | 60 | 0 | 74 | 187 | 4652404 | 4652517 | Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.198_cln chromosome, complete genome | blastn | 29399 | 189 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 4277091 | 4277091 | PRJNA488043_S_NODE_604_length_240_cov_9.672986_g593_i0 | PRJNA488043 | 604 | 240 | 9.672986 | 23.2151664 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 270 | 5.47e-68 | NTclustered | gi|76574293|gb|DQ139441.1| | 171953 | g593 | i0 | 87.029 | 45.7458333333333 | 239 | 31 | 99 | 0 | 1 | 239 | 314 | 76 | Uncultured Acidobacteria bacterium clone CAL1 23S ribosomal RNA gene, partial sequence | blastn | 10979 | 270 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 6201031 | 6201031 | PRJNA488043_P_NODE_16645_length_206_cov_3.169492_g14403_i0 | PRJNA488043 | 16645 | 206 | 3.169492 | 6.52915352 | Bacteria | 2 | Bacteria | Bacteria | 198 | 2.19e-46 | NTclustered | gi|2874253692|emb|OY969418.1| | 171953 | g14403 | i0 | 92.199 | 1.3495145631068 | 141 | 10 | 68 | 1 | 1 | 141 | 4677234 | 4677095 | MAG: uncultured Acidobacteriota bacterium isolate MFD09212.bin.c.1 genome assembly, chromosome: 1 | blastn | 278 | 198 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 8103142 | 8103142 | PRJNA488043_S_NODE_1227_length_174_cov_6.648276_g1216_i0 | PRJNA488043 | 1227 | 174 | 6.648276 | 11.56800024 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 257 | 2.89e-64 | NTclustered | gi|2874254139|emb|OY970224.1| | 171953 | g1216 | i0 | 93.605 | 226.068965517241 | 172 | 11 | 99 | 0 | 1 | 172 | 1715527 | 1715356 | MAG: uncultured Acidobacteriota bacterium isolate MFD04967.bin.c.6 genome assembly, chromosome: 1 | blastn | 39336 | 257 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 8103145 | 8103145 | PRJNA488043_S_NODE_1487_length_159_cov_8.469231_g1476_i0 | PRJNA488043 | 1487 | 159 | 8.469231 | 13.46607729 | Vicinamibacterales bacterium | 2910147 | Bacteria | Bacteria | 75 | 2.81e-9 | NTclustered | gi|2893358444|emb|OZ220736.1| | 2910147 | g1476 | i0 | 87.879 | 21.1698113207547 | 66 | 5 | 40 | 3 | 1 | 64 | 3682028 | 3682092 | MAG: Vicinamibacterales bacterium isolate e96e4bd8-36b5-4932-a7c8-d2011ef2eb69 genome assembly, chromosome: 1 | blastn | 3366 | 75 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Vicinamibacteria | Vicinamibacterales | Vicinamibacterales bacterium | ||||
| 15752576 | 15752576 | PRJNA488043_P_NODE_21593_length_157_cov_5.445312_g19351_i0 | PRJNA488043 | 21593 | 157 | 5.445312 | 8.54913984 | uncultured Acidobacteriaceae bacterium | 194844 | Bacteria | Bacteria | 152 | 1.24e-32 | NTclustered | gi|2874253796|emb|OY969780.1| | 194844 | g19351 | i0 | 89.256 | 275.573248407643 | 121 | 13 | 77 | 0 | 37 | 157 | 283872 | 283752 | MAG: uncultured Acidobacteriaceae bacterium isolate MFD09603.bin.c.4 genome assembly, chromosome: 1 | blastn | 43265 | 152 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | uncultured Acidobacteriaceae bacterium | |||
| 17027239 | 17027239 | PRJNA488043_P_NODE_5494_length_558_cov_104.514178_g3526_i0 | PRJNA488043 | 5494 | 558 | 104.514178 | 583.18911324 | Thermoanaerobaculia bacterium | 2651171 | Bacteria | Bacteria | 350 | 1.7400000000000002e-91 | NTclustered | gi|2621701942|emb|OY761158.1| | 2651171 | g3526 | i0 | 78.393 | 823.544802867384 | 560 | 106 | 99 | 15 | 1 | 550 | 3583695 | 3583141 | MAG: Thermoanaerobaculia bacterium isolate 1b26a83f-5f0d-4c2c-8de2-47f95369405e genome assembly, chromosome: 1 | blastn | 459538 | 350 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Thermoanaerobaculia | Thermoanaerobaculia bacterium | |||||
| 20851675 | 20851675 | PRJNA488043_S_NODE_597_length_241_cov_12.216981_g586_i0 | PRJNA488043 | 597 | 241 | 12.216981 | 29.44292421 | Paludibaculum fermentans | 1473598 | Bacteria | Bacteria | 407 | 4.0199999999999995e-109 | NTclustered | gi|1929489624|gb|CP063849.1| | 1473598 | g586 | i0 | 97.095 | 1 | 241 | 7 | 100 | 0 | 1 | 241 | 2772798 | 2772558 | Paludibaculum fermentans strain P105 chromosome, complete genome | blastn | 241 | 407 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacteraceae | Paludibaculum | Paludibaculum fermentans |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;