contig_metadata
24 rows where analysis = "blastn", bioproject = "PRJNA488043" and tax_kingdom = "Thermotogati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 450102 | 450102 | PRJNA488043_S_NODE_1141_length_179_cov_46.993333_g1130_i0 | PRJNA488043 | 1141 | 179 | 46.993333 | 84.11806607 | Deinococcus aquaticus | 328692 | Bacteria | Bacteria | 326 | 8.09e-85 | NTclustered | gi|2444120906|gb|CP115165.1| | 328692 | g1130 | i0 | 99.441 | 209.156424581006 | 179 | 1 | 100 | 0 | 1 | 179 | 714877 | 715055 | Deinococcus aquaticus strain PB-314 chromosome, complete genome | blastn | 37439 | 326 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus aquaticus | ||
| 1097837 | 1097837 | PRJNA488043_P_NODE_10081_length_337_cov_2.448052_g7840_i0 | PRJNA488043 | 10081 | 337 | 2.448052 | 8.24993524 | Thermus | 270 | Bacteria | Bacteria | 571 | 1.97e-158 | NTclustered | gi|2701833777|dbj|AP031329.1| | 274 | g7840 | i0 | 96.839 | 285.480712166172 | 348 | 0 | 100 | 1 | 1 | 337 | 34111 | 33764 | Thermus thermophilus TF24 plasmid pTF24b DNA, complete sequence | blastn | 96207 | 571 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus thermophilus | ||
| 2373495 | 2373495 | PRJNA488043_P_NODE_6602_length_489_cov_16.504348_g4527_i0 | PRJNA488043 | 6602 | 489 | 16.504348 | 80.70626172 | Deinococcus | 1298 | Bacteria | Bacteria | 398 | 5.32e-106 | NTclustered | gi|2076241620|gb|MZ708738.1| | 47478 | g4527 | i0 | 97.425 | 102.685071574642 | 233 | 6 | 80 | 0 | 1 | 233 | 447 | 215 | Deinococcus sp. strain JXJ CY 31 16S ribosomal RNA gene, partial sequence | blastn | 50213 | 398 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. | ||
| 4276879 | 4276879 | PRJNA488043_P_NODE_14024_length_242_cov_42.751174_g11782_i0 | PRJNA488043 | 14024 | 242 | 42.751174 | 103.45784108 | Deinococcus grandis | 57498 | Bacteria | Bacteria | 442 | 1.1099999999999995e-119 | NTclustered | gi|1751871007|dbj|AP021849.1| | 57498 | g11782 | i0 | 99.587 | 182.400826446281 | 242 | 1 | 100 | 0 | 1 | 242 | 3060876 | 3060635 | Deinococcus grandis ATCC 43672 DNA, complete genome | blastn | 44141 | 442 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus grandis | ||
| 4925990 | 4925990 | PRJNA488043_P_NODE_1484_length_1333_cov_3.037577_g606_i0 | PRJNA488043 | 1484 | 1333 | 3.037577 | 40.49090141 | Thermus | 270 | Bacteria | Bacteria | 2394 | 0 | NTclustered | gi|1352798305|gb|CP020572.1| | 271 | g606 | i0 | 99.544 | 47.0960240060015 | 1317 | 1 | 98 | 1 | 13 | 1324 | 35339 | 34023 | Thermus aquaticus strain YT-1 plasmid p61, complete sequence | blastn | 62779 | 2416 | 0.990894039735099 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus aquaticus | ||
| 4926046 | 4926046 | PRJNA488043_P_NODE_20924_length_163_cov_1.947761_g18682_i0 | PRJNA488043 | 20924 | 163 | 1.947761 | 3.17485043 | Thermus | 270 | Bacteria | Bacteria | 195 | 2.13e-45 | NTclustered | gi|1886401075|gb|CP053288.1| | 274 | g18682 | i0 | 100 | 272.441717791411 | 105 | 0 | 98 | 0 | 1 | 105 | 90566 | 90462 | Thermus thermophilus strain HB27c plasmid pTT27, complete sequence | blastn | 44408 | 195 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus thermophilus | ||
| 4926176 | 4926176 | PRJNA488043_S_NODE_1024_length_188_cov_9.654088_g1013_i0 | PRJNA488043 | 1024 | 188 | 9.654088 | 18.14968544 | Deinococcus | 1298 | Bacteria | Bacteria | 265 | 1.9000000000000001e-66 | NTclustered | gi|1435316362|gb|CP031158.1| | 980427 | g1013 | i0 | 100 | 184.212765957447 | 143 | 0 | 76 | 0 | 5 | 147 | 1793658 | 1793516 | Deinococcus wulumuqiensis strain NEB 479 chromosome, complete genome | blastn | 34632 | 265 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus wulumuqiensis | ||
| 6827582 | 6827582 | PRJNA488043_P_NODE_9786_length_347_cov_2.383648_g7547_i0 | PRJNA488043 | 9786 | 347 | 2.383648 | 8.27125856 | Thermus parvatiensis | 456163 | Bacteria | Bacteria | 531 | 3.4599999999999992e-146 | NTclustered | gi|982540758|gb|CP014142.1| | 456163 | g7547 | i0 | 93.036 | 288.158501440922 | 359 | 11 | 99 | 3 | 1 | 345 | 124721 | 125079 | Thermus parvatiensis strain RL plasmid pTP143, complete sequence | blastn | 99991 | 531 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus parvatiensis | ||
| 7475929 | 7475929 | PRJNA488043_P_NODE_21106_length_161_cov_3.780303_g18864_i0 | PRJNA488043 | 21106 | 161 | 3.780303 | 6.08628783 | Deinococcus | 1298 | Bacteria | Bacteria | 250 | 4.42e-62 | NTclustered | gi|2264081587|gb|CP094462.1| | 1299 | g18864 | i0 | 99.275 | 449.130434782609 | 138 | 1 | 97 | 0 | 10 | 147 | 775273 | 775136 | Deinococcus radiodurans strain BRD125 chromosome 1, complete sequence | blastn | 72310 | 250 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus radiodurans | ||
| 8102860 | 8102860 | PRJNA488043_P_NODE_11447_length_296_cov_112.614232_g9206_i0 | PRJNA488043 | 11447 | 296 | 112.614232 | 333.33812672 | Deinococcus actinosclerus | 1768108 | Bacteria | Bacteria | 481 | 2.96e-131 | NTclustered | gi|972944657|gb|CP013910.1| | 1768108 | g9206 | i0 | 97.193 | 95.5101351351351 | 285 | 6 | 96 | 2 | 1 | 284 | 19306 | 19589 | Deinococcus actinosclerus strain BM2 chromosome, complete genome | blastn | 28271 | 481 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus actinosclerus | ||
| 8103037 | 8103037 | PRJNA488043_P_NODE_3667_length_747_cov_66.455432_g2035_i0 | PRJNA488043 | 3667 | 747 | 66.455432 | 496.42207704 | Deinococcus actinosclerus | 1768108 | Bacteria | Bacteria | 1162 | 0 | NTclustered | gi|972944657|gb|CP013910.1| | 1768108 | g2035 | i0 | 97.778 | 290.838018741633 | 675 | 14 | 91 | 1 | 1 | 675 | 3085867 | 3086540 | Deinococcus actinosclerus strain BM2 chromosome, complete genome | blastn | 217256 | 1162 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus actinosclerus | ||
| 9377766 | 9377766 | PRJNA488043_P_NODE_3108_length_834_cov_32.318012_g1629_i0 | PRJNA488043 | 3108 | 834 | 32.318012 | 269.53222008 | Deinococcus actinosclerus | 1768108 | Bacteria | Bacteria | 1271 | 0 | NTclustered | gi|972944657|gb|CP013910.1| | 1768108 | g1629 | i0 | 94.265 | 401.365707434053 | 837 | 38 | 100 | 9 | 1 | 834 | 74166 | 74995 | Deinococcus actinosclerus strain BM2 chromosome, complete genome | blastn | 334739 | 1271 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus actinosclerus | ||
| 11301303 | 11301303 | PRJNA488043_S_NODE_269_length_339_cov_482.651613_g258_i0 | PRJNA488043 | 269 | 339 | 482.651613 | 1636.18896807 | Deinococcus | 1298 | Bacteria | Bacteria | 604 | 1.9599999999999993e-168 | NTclustered | gi|2095695476|gb|OK149243.1| | 47478 | g258 | i0 | 98.82 | 102 | 339 | 4 | 100 | 0 | 1 | 339 | 765 | 427 | Deinococcus sp. strain ATSAR 16S ribosomal RNA gene, partial sequence | blastn | 34578 | 604 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. | ||
| 11928596 | 11928596 | PRJNA488043_P_NODE_4710_length_623_cov_2.407407_g2852_i0 | PRJNA488043 | 4710 | 623 | 2.407407 | 14.99814561 | Thermus thermophilus | 274 | Bacteria | Bacteria | 1149 | 0 | NTclustered | gi|1519241055|emb|LR027520.1| | 274 | g2852 | i0 | 100 | 164.736757624398 | 622 | 0 | 99 | 0 | 1 | 622 | 310801 | 311422 | Thermus thermophilus isolate TTHNAR1 genome assembly, plasmid: 4 | blastn | 102631 | 1149 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus thermophilus | ||
| 12576843 | 12576843 | PRJNA488043_P_NODE_15050_length_227_cov_2.050505_g12808_i0 | PRJNA488043 | 15050 | 227 | 2.050505 | 4.65464635 | Thermus | 270 | Bacteria | Bacteria | 165 | 2.49e-36 | NTclustered | gi|2701833777|dbj|AP031329.1| | 274 | g12808 | i0 | 100 | 208.859030837004 | 89 | 0 | 74 | 0 | 139 | 227 | 122656 | 122568 | Thermus thermophilus TF24 plasmid pTF24b DNA, complete sequence | blastn | 47411 | 165 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus thermophilus | ||
| 13203400 | 13203400 | PRJNA488043_P_NODE_11011_length_308_cov_2.684588_g8770_i0 | PRJNA488043 | 11011 | 308 | 2.684588 | 8.26853104 | Thermus parvatiensis | 456163 | Bacteria | Bacteria | 549 | 8.359999999999996e-152 | NTclustered | gi|982540758|gb|CP014142.1| | 456163 | g8770 | i0 | 99.02 | 279.571428571429 | 306 | 3 | 99 | 0 | 1 | 306 | 124774 | 125079 | Thermus parvatiensis strain RL plasmid pTP143, complete sequence | blastn | 86108 | 549 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus parvatiensis | ||
| 13851708 | 13851708 | PRJNA488043_S_NODE_231_length_361_cov_75.463855_g220_i0 | PRJNA488043 | 231 | 361 | 75.463855 | 272.42451655 | Deinococcus | 1298 | Bacteria | Bacteria | 628 | 1.2399999999999997e-175 | NTclustered | gi|1435316362|gb|CP031158.1| | 980427 | g220 | i0 | 98.061 | 490.495844875346 | 361 | 7 | 100 | 0 | 1 | 361 | 1792599 | 1792239 | Deinococcus wulumuqiensis strain NEB 479 chromosome, complete genome | blastn | 177069 | 628 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus wulumuqiensis | ||
| 18949393 | 18949393 | PRJNA488043_P_NODE_1735_length_1196_cov_3.374464_g747_i0 | PRJNA488043 | 1735 | 1196 | 3.374464 | 40.35858944 | Thermus | 270 | Bacteria | Bacteria | 2174 | 0 | NTclustered | gi|1519241055|emb|LR027520.1| | 274 | g747 | i0 | 99.915 | 97.8745819397993 | 1180 | 1 | 99 | 0 | 9 | 1188 | 190762 | 189583 | Thermus thermophilus isolate TTHNAR1 genome assembly, plasmid: 4 | blastn | 117058 | 2185 | 0.994965675057208 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus thermophilus | ||
| 19575777 | 19575777 | PRJNA488043_P_NODE_7716_length_429_cov_47.210000_g5544_i0 | PRJNA488043 | 7716 | 429 | 47.21 | 202.5309 | Deinococcus actinosclerus | 1768108 | Bacteria | Bacteria | 782 | 0 | NTclustered | gi|972944657|gb|CP013910.1| | 1768108 | g5544 | i0 | 99.534 | 207.592074592075 | 429 | 2 | 100 | 0 | 1 | 429 | 73212 | 73640 | Deinococcus actinosclerus strain BM2 chromosome, complete genome | blastn | 89057 | 782 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus actinosclerus | ||
| 20224280 | 20224280 | PRJNA488043_P_NODE_1616_length_1264_cov_3.102024_g606_i1 | PRJNA488043 | 1616 | 1264 | 3.102024 | 39.20958336 | Thermus | 270 | Bacteria | Bacteria | 1362 | 0 | NTclustered | gi|1352798305|gb|CP020572.1| | 271 | g606 | i1 | 99.865 | 47.1384493670886 | 740 | 1 | 98 | 0 | 10 | 749 | 34023 | 34762 | Thermus aquaticus strain YT-1 plasmid p61, complete sequence | blastn | 59583 | 1365 | 0.997802197802198 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus aquaticus | ||
| 22126463 | 22126463 | PRJNA488043_P_NODE_8858_length_378_cov_74.332378_g6639_i0 | PRJNA488043 | 8858 | 378 | 74.332378 | 280.97638884 | Deinococcus actinosclerus | 1768108 | Bacteria | Bacteria | 486 | 8.329999999999999e-133 | NTclustered | gi|972944657|gb|CP013910.1| | 1768108 | g6639 | i0 | 95.146 | 276.835978835979 | 309 | 14 | 81 | 1 | 1 | 308 | 75784 | 76092 | Deinococcus actinosclerus strain BM2 chromosome, complete genome | blastn | 104644 | 486 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus actinosclerus | ||
| 22774845 | 22774845 | PRJNA488043_P_NODE_13598_length_250_cov_2.434389_g11356_i0 | PRJNA488043 | 13598 | 250 | 2.434389 | 6.0859725 | Thermus | 270 | Bacteria | Bacteria | 364 | 2.559999999999999e-96 | NTclustered | gi|2701837056|dbj|AP031332.1| | 274 | g11356 | i0 | 99.5 | 179.188 | 200 | 1 | 100 | 0 | 51 | 250 | 136516 | 136317 | Thermus thermophilus TF27 DNA, complete genome | blastn | 44797 | 364 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Thermales | Thermaceae | Thermus | Thermus thermophilus | ||
| 24049957 | 24049957 | PRJNA488043_S_NODE_179_length_390_cov_25.556787_g168_i0 | PRJNA488043 | 179 | 390 | 25.556787 | 99.6714693 | Deinococcus | 1298 | Bacteria | Bacteria | 575 | 1.7899999999999995e-159 | NTclustered | gi|2444120906|gb|CP115165.1| | 328692 | g168 | i0 | 98.176 | 228.782051282051 | 329 | 6 | 84 | 0 | 62 | 390 | 714212 | 713884 | Deinococcus aquaticus strain PB-314 chromosome, complete genome | blastn | 89225 | 575 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus aquaticus | ||
| 25324268 | 25324268 | PRJNA488043_S_NODE_160_length_403_cov_458.101604_g149_i0 | PRJNA488043 | 160 | 403 | 458.101604 | 1846.14946412 | Deinococcus | 1298 | Bacteria | Bacteria | 739 | 0 | NTclustered | gi|2095695476|gb|OK149243.1| | 47478 | g149 | i0 | 99.752 | 102.004962779156 | 403 | 1 | 100 | 0 | 1 | 403 | 74 | 476 | Deinococcus sp. strain ATSAR 16S ribosomal RNA gene, partial sequence | blastn | 41108 | 739 | 1 | Bacteria | Thermotogati | Deinococcota | Deinococci | Deinococcales | Deinococcaceae | Deinococcus | Deinococcus sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;