RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA488043" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 5 ✖

bioproject 1

  • PRJNA488043 · 5 ✖

analysis 1

  • blastn · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11301102 11301102 PRJNA488043_P_NODE_13809_length_246_cov_28.861751_g11567_i0 PRJNA488043 13809 246 28.861751 70.99990746 root 1 Root_unresolved Root_unresolved 152 2.13e-32   NTclustered gi|2620236085|gb|OR777220.1| 10515 g11567 i0 100 78.4552845528455 82 0 79 0 1 82 15025 15106 Human adenovirus 2 isolate HAdV-C2/USA/13R1/2017, complete genome blastn 19300 152 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
11301191 11301191 PRJNA488043_P_NODE_22229_length_152_cov_25.439024_g19987_i0 PRJNA488043 22229 152 25.439024 38.66731648 root 1 Root_unresolved Root_unresolved 174 2.54e-39   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g19987 i0 100 100.368421052632 94 0 100 0 1 94 11276 11369 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 15256 174 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
12576879 12576879 PRJNA488043_P_NODE_18910_length_182_cov_21.398693_g16668_i0 PRJNA488043 18910 182 21.398693 38.94562126 root 1 Root_unresolved Root_unresolved 183 5.259999999999998e-42   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g16668 i0 100 79.4175824175824 99 0 80 0 1 99 18302 18400 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 14454 183 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
18301419 18301419 PRJNA488043_P_NODE_13875_length_245_cov_9.773148_g11633_i0 PRJNA488043 13875 245 9.773148 23.9442126 Mastadenovirus caesari 3241411 Viruses Viruses 248 2.6299999999999997e-61   NTclustered gi|1706705536|gb|MK165453.1| 129951 g11633 i0 99.27 93.8612244897959 137 1 94 0 104 240 11297 11161 Human mastadenovirus C isolate SX-2004-327 blastn 22996 248 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
24049741 24049741 PRJNA488043_P_NODE_12599_length_269_cov_14.045833_g10358_i0 PRJNA488043 12599 269 14.045833 37.78329077 root 1 Root_unresolved Root_unresolved 185 2.3299999999999993e-42   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g10358 i0 100 73.2825278810409 100 0 74 0 60 159 14825 14924 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 19713 185 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;