RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA485080" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 7 ✖

bioproject 1

  • PRJNA485080 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1723747 1723747 PRJNA485080_P_NODE_1982_length_634_cov_1.661319_g1892_i0 PRJNA485080 1982 634 1.661319 10.53276246 Zebrafish picornavirus 1 2304617 Viruses Viruses 1083 0   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g1892 i0 97.476 3.40694006309148 634 16 100 0 1 634 7450 8083 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 2160 1083 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
5552777 5552777 PRJNA485080_P_NODE_3165_length_520_cov_1.809843_g3071_i0 PRJNA485080 3165 520 1.809843 9.4111836 Zebrafish picornavirus 1 2304617 Viruses Viruses 859 0   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g3071 i0 96.532 2.99423076923077 519 18 99 0 2 520 6833 6315 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 1557 859 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
6826584 6826584 PRJNA485080_P_NODE_17006_length_279_cov_1.495146_g16912_i0 PRJNA485080 17006 279 1.495146 4.17145734 Zebrafish picornavirus 1 2304617 Viruses Viruses 483 7.689999999999998e-132   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g16912 i0 97.849 3 279 6 100 0 1 279 7137 6859 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 837 483 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
15751640 15751640 PRJNA485080_P_NODE_13653_length_303_cov_1.230435_g13559_i0 PRJNA485080 13653 303 1.230435 3.72821805 Zebrafish picornavirus 1 2304617 Viruses Viruses 532 8.269999999999998e-147   NTclustered gi|1990739381|tpg|BK011179.1| 2304617 g13559 i0 98.35 3 303 5 100 0 1 303 5942 6244 TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome blastn 909 532 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
15751927 15751927 PRJNA485080_P_NODE_3513_length_496_cov_585.392435_g3419_i0 PRJNA485080 3513 496 585.392435 2903.5464776 Lycium betacytorhabdovirus 1 3078349 Viruses Viruses 117 1.69e-21   NTclustered gi|2618835662|tpg|BK064324.1| 3078349 g3419 i0 98.485 2.38306451612903 66 1 20 0 365 430 6 71 TPA_asm: Lycium betacytorhabdovirus 1 cRNA sequence blastn 1182 117 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Lycium betacytorhabdovirus 1
17026656 17026656 PRJNA485080_P_NODE_44034_length_219_cov_10.568493_g43940_i0 PRJNA485080 44034 219 10.568493 23.14499967 Lycium betacytorhabdovirus 1 3078349 Viruses Viruses 130 8.7e-26   NTclustered gi|2618835662|tpg|BK064324.1| 3078349 g43940 i0 100 2.87214611872146 70 0 32 0 149 218 71 2 TPA_asm: Lycium betacytorhabdovirus 1 cRNA sequence blastn 629 130 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Lycium betacytorhabdovirus 1
18948898 18948898 PRJNA485080_P_NODE_34775_length_245_cov_0.895349_g34681_i0 PRJNA485080 34775 245 0.895349 2.19360505 Orthorubulavirus 2560195 Viruses Viruses 453 5.1900000000000006e-123   NTclustered gi|1540352612|gb|MK117734.1| 2560580 g34681 i0 100 96.9836734693878 245 0 100 0 1 245 1167 1411 Mammalian orthorubulavirus 5 isolate XJ-WLMQ fusion protein mRNA, complete cds blastn 23761 453 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;