RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA485080" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_kingdom 1

  • Bamfordvirae · 2 ✖

bioproject 1

  • PRJNA485080 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13202931 13202931 PRJNA485080_P_NODE_38791_length_243_cov_0.905882_g38697_i0 PRJNA485080 38791 243 0.905882 2.20129326 Biavirus raunefjordenense 3059777 Viruses Viruses 60.2 1.31e-4   NTclustered gi|2500387999|ref|NC_077221.1| 1499987 g38697 i0 97.143 0.1440329218107 35 1 14 0 126 160 1207918 1207952 Prymnesium kappa virus genome assembly, chromosome: 1 blastn 35 60.2 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Schizomimiviridae Biavirus Biavirus raunefjordenense
24049304 24049304 PRJNA485080_P_NODE_36759_length_244_cov_0.900585_g36665_i0 PRJNA485080 36759 244 0.900585 2.1974274 Mastadenovirus 10509 Viruses Viruses 52.8 0.022   NTclustered gi|1377596870|gb|MF044052.1| 10515 g36665 i0 100 0.80327868852459 28 0 11 0 196 223 3871 3844 human adenovirus 2 isolate HK91, complete genome blastn 196 52.8 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;