RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA485080" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 4 ✖

bioproject 1

  • PRJNA485080 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6200541 6200541 PRJNA485080_P_NODE_23065_length_251_cov_0.865169_g22971_i0 PRJNA485080 23065 251 0.865169 2.17157419 Nodosilinea 1120752 Bacteria Bacteria 394 3.28e-105   NTclustered gi|1435360276|gb|MH688851.1| 2290992 g22971 i0 97.807 121.880478087649 228 5 91 0 1 228 2510 2283 Nodosilinea cf. epilithica Us-2-1 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 30592 394 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nodosilineales Nodosilineaceae Nodosilinea Nodosilinea epilithica
14477679 14477679 PRJNA485080_P_NODE_24312_length_250_cov_0.870056_g24218_i0 PRJNA485080 24312 250 0.870056 2.17514 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 331 2.6e-86   NTclustered gi|1958007833|gb|CP064963.1| 2052166 g24218 i0 91.02 97.592 245 22 98 0 1 245 3681671 3681915 MAG: Candidatus Melainabacteria bacterium isolate Aved_18-Q3-R54-62_BATAC.358_cln chromosome, complete genome blastn 24398 331 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
15751714 15751714 PRJNA485080_P_NODE_18853_length_267_cov_1.804124_g18759_i0 PRJNA485080 18853 267 1.804124 4.81701108 uncultured Chroococcidiopsis sp. 259957 Bacteria Bacteria 477 3.3999999999999993e-130   NTclustered gi|225696219|gb|FJ805886.1| 259957 g18759 i0 98.876 122.153558052434 267 3 100 0 1 267 2564 2298 Uncultured Chroococcidiopsis sp. clone NA4_4 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 32615 477 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcidiopsidales Chroococcidiopsidaceae Chroococcidiopsis uncultured Chroococcidiopsis sp.
19574993 19574993 PRJNA485080_P_NODE_3316_length_509_cov_1.589450_g3222_i0 PRJNA485080 3316 509 1.58945 8.0903005 Nostoc sp. NIES-2111 1973475 Bacteria Bacteria 54.7 0.014   NTclustered gi|1210123166|dbj|AP018191.1| 1973475 g3222 i0 96.875 0.227897838899804 32 1 6 0 418 449 18092 18123 Nostoc sp. NIES-2111 plasmid plasmid7 DNA, complete genome blastn 116 54.7 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Nostocaceae Nostoc Nostoc sp. NIES-2111

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;