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contig_metadata

18 rows where analysis = "blastn", bioproject = "PRJNA484127" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 18 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA484127 · 18 ✖

analysis 1

  • blastn · 18 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1723407 1723407 PRJNA484127_P_NODE_36542_length_244_cov_4.000000_g36393_i0 PRJNA484127 36542 244 4 9.76 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 174 4.5e-39   NTclustered gi|1800329609|gb|MN417951.1| 104777 g36393 i0 79.508 8.37295081967213 244 50 100 0 1 244 10088 9845 Brachionus calyciflorus chromosome I mitochondrion, complete sequence blastn 2043 174 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
4275523 4275523 PRJNA484127_P_NODE_24404_length_273_cov_1.530000_g24255_i0 PRJNA484127 24404 273 1.53 4.1769 Brachionus angularis 396692 Rotifera other_Eukaryota 294 3.77e-75   NTclustered gi|1999716438|gb|MT875426.1| 396692 g24255 i0 86.131 92.7655677655678 274 36 100 2 1 273 958 686 Brachionus angularis chromosome II mitochondrion, complete sequence blastn 25325 294 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus angularis
5552307 5552307 PRJNA484127_P_NODE_3705_length_577_cov_2.301587_g3560_i0 PRJNA484127 3705 577 2.301587 13.28015699 Asplanchna sp. 3231738 Rotifera other_Eukaryota 361 8.329999999999999e-95   NTclustered gi|2778092479|gb|PP988071.1| 3231738 g3560 i0 79.292 24.57712305026 565 79 95 30 30 577 2406 1863 Asplanchna sp. chromosome I mitochondrion, complete sequence blastn 14181 361 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Asplanchnidae Asplanchna Asplanchna sp.
6825936 6825936 PRJNA484127_P_NODE_17286_length_311_cov_1.966387_g17137_i0 PRJNA484127 17286 311 1.966387 6.11546357 Brachionus sp. JMP-2011 1068660 Rotifera other_Eukaryota 195 4.56e-45   NTclustered gi|340748003|gb|JN035900.1| 1068660 g17137 i0 78.413 34.7202572347267 315 57 99 10 2 311 6 314 Brachionus sp. JMP-2011 clone 45_PET8_29 large subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 10798 195 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus sp. JMP-2011
9376064 9376064 PRJNA484127_P_NODE_10348_length_378_cov_1.278689_g10199_i0 PRJNA484127 10348 378 1.278689 4.83344442 Adineta vaga complex sp. B JFF-2016 1813165 Rotifera other_Eukaryota 553 8.099999999999998e-153   NTclustered gi|1005055631|gb|KU860774.1| 1813165 g10199 i0 93.103 54.0476190476191 377 26 99 0 1 377 1697 2073 Adineta vaga complex sp. B JFF-2016 isolate H158a 28S ribosomal RNA gene, partial sequence blastn 20430 553 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga complex sp. B JFF-2016
10652237 10652237 PRJNA484127_P_NODE_25969_length_266_cov_1.906736_g25820_i0 PRJNA484127 25969 266 1.906736 5.07191776 Philodina citrina 468664 Rotifera other_Eukaryota 329 1e-85   NTclustered gi|407227484|emb|FR856884.1| 468664 g25820 i0 89.313 63.4022556390977 262 28 98 0 5 266 568 829 Philodina citrina complete mitochondrial genome blastn 16865 329 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
10652486 10652486 PRJNA484127_P_NODE_5249_length_498_cov_2.007059_g5101_i0 PRJNA484127 5249 498 2.007059 9.99515382 Brachionus rubens 392764 Rotifera other_Eukaryota 372 3.29e-98   NTclustered gi|632795126|gb|KJ489417.1| 392764 g5101 i0 80.318 40.6305220883534 503 89 100 10 1 498 679 182 Brachionus rubens chromosome I mitochondrion, complete sequence blastn 20234 372 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rubens
11927450 11927450 PRJNA484127_P_NODE_5770_length_478_cov_3.844444_g5622_i0 PRJNA484127 5770 478 3.844444 18.37644232 Philodina citrina 468664 Rotifera other_Eukaryota 448 5.0799999999999984e-121   NTclustered gi|407227484|emb|FR856884.1| 468664 g5622 i0 84.11 25.0753138075314 472 65 98 9 9 478 1744 2207 Philodina citrina complete mitochondrial genome blastn 11986 448 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
13201877 13201877 PRJNA484127_P_NODE_10811_length_371_cov_2.006711_g10662_i0 PRJNA484127 10811 371 2.006711 7.44489781 Philodina roseola 96448 Rotifera other_Eukaryota 422 2.33e-113   NTclustered gi|6018198|gb|AF143851.1|AF143851 96448 g10662 i0 87.778 34.5256064690027 360 44 97 0 10 369 648 289 Philodina roseola 82 kD heat shock protein 1 (hsp82-1) gene, partial cds blastn 12809 422 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
14476940 14476940 PRJNA484127_P_NODE_17372_length_311_cov_1.239496_g17223_i0 PRJNA484127 17372 311 1.239496 3.85483256 Philodina roseola 96448 Rotifera other_Eukaryota 272 2.0499999999999993e-68   NTclustered gi|183178937|gb|EU432547.1| 96448 g17223 i0 85.878 10.7459807073955 262 30 83 4 1 257 29619 29360 Philodina roseola TAR protein gene, partial cds; U1-like Zn-finger-containing protein (U1Zn_1), unknown (PruORF0001_1), unknown (PrPCG0001_1), methione sulfide reductase B (MSRB_1), Strabismus, serine-threonin kinase copy 1, plasma membrane calcium-dependent ATPase (CAse_1), myosin essential light chain (MELC_1), and 82 kDa heat shock protein (hsp82_1) genes, complete cds; FBoxLRR_1 gene, complete sequence; and TPRA_1 (TPRA_1) gene, complete cds blastn 3342 272 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
14477312 14477312 PRJNA484127_P_NODE_38332_length_242_cov_2.272189_g38183_i0 PRJNA484127 38332 242 2.272189 5.49869738 Adineta sp. SCL-15-7 2843316 Rotifera other_Eukaryota 267 7.15e-67   NTclustered gi|2049839123|gb|MT997071.1| 2843316 g38183 i0 85.774 89.7190082644628 239 34 99 0 2 240 30 268 Adineta sp. SCL-15-7 actin gene, partial cds blastn 21712 267 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta sp. SCL-15-7
14477369 14477369 PRJNA484127_P_NODE_4952_length_510_cov_1.633867_g4805_i0 PRJNA484127 4952 510 1.633867 8.3327217 Brachionus urceolaris 204736 Rotifera other_Eukaryota 571 3.0999999999999998e-158   NTclustered gi|403492655|gb|JX193066.1| 204736 g4805 i0 86.561 98.2529411764706 506 68 99 0 2 507 235 740 Brachionus urceolaris isolate A458b alpha tubulin gene, partial cds blastn 50109 571 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus urceolaris
15125315 15125315 PRJNA484127_P_NODE_7912_length_419_cov_3.465318_g7764_i0 PRJNA484127 7912 419 3.465318 14.51968242 Brachionus 10194 Rotifera other_Eukaryota 261 6.16e-65   NTclustered gi|1066800225|gb|KX364936.1| 96890 g7764 i0 79.688 52.4439140811456 384 60 90 16 44 419 9473 9846 Brachionus rotundiformis chromosome I mitochondrion, complete sequence blastn 21974 263 0.992395437262357 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus rotundiformis
17026102 17026102 PRJNA484127_P_NODE_7794_length_422_cov_2.340974_g7646_i0 PRJNA484127 7794 422 2.340974 9.87891028 Philodina roseola 96448 Rotifera other_Eukaryota 440 7.419999999999997e-119   NTclustered gi|183178949|gb|EU432548.1| 96448 g7646 i0 85.511 3.99526066350711 421 61 99 0 2 422 39558 39978 Philodina roseola guanylyl cyclase gene, complete sequence; and TAR-protein (TAR_2), U1-like Zn-finger-containing protein (U1Zn_2), unknown (PruORF0001_2), unknown (PrPCG0001_2), methione sulfide reductase B (MSRB_2), Strabismus, serine-threonin kinase copy 2, plasma membrane calcium-dependent ATPase (CAse_2), myosin essential light chain (MELC_2), 82 kDa heat shock protein (hsp82_4), FBox-LRR protein (FBoxLRR_2), TPRA_2 (TPRA_2), phosphoribosylaminoimidazole carboxylase (PAICS_2), and unknown (PruORF0002_2) genes, complete cds blastn 1686 440 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
19574557 19574557 PRJNA484127_P_NODE_40836_length_199_cov_5.968254_g40687_i0 PRJNA484127 40836 199 5.968254 11.87682546 Rotaria rotatoria 231624 Rotifera other_Eukaryota 220 4.47e-53   NTclustered gi|270267490|ref|NC_013568.1| 231624 g40687 i0 86.935 2.89949748743719 199 23 99 3 1 198 2207 2403 Rotaria rotatoria mitochondrion, complete genome blastn 577 220 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria rotatoria
23400895 23400895 PRJNA484127_P_NODE_31459_length_251_cov_0.876404_g31310_i0 PRJNA484127 31459 251 0.876404 2.19977404 Philodina roseola 96448 Rotifera other_Eukaryota 244 3.5000000000000003e-60   NTclustered gi|572455682|gb|KF159020.1| 96448 g31310 i0 87.5 70.2151394422311 216 22 86 5 37 251 659 448 Philodina roseola myosin heavy chain type II mRNA, partial cds blastn 17624 244 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
23401077 23401077 PRJNA484127_P_NODE_6199_length_465_cov_1.377551_g6051_i0 PRJNA484127 6199 465 1.377551 6.40561215 Brachionus urceolaris 204736 Rotifera other_Eukaryota 479 1.7499999999999995e-130   NTclustered gi|403492655|gb|JX193066.1| 204736 g6051 i0 84.881 97.8064516129032 463 70 99 0 1 463 721 259 Brachionus urceolaris isolate A458b alpha tubulin gene, partial cds blastn 45480 479 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus urceolaris
24049203 24049203 PRJNA484127_P_NODE_3099_length_625_cov_4.902174_g2956_i0 PRJNA484127 3099 625 4.902174 30.6385875 Ploima 84394 Rotifera other_Eukaryota 353 1.52e-92   NTclustered gi|1800329609|gb|MN417951.1| 104777 g2956 i0 79.584 52.9408 529 80 83 22 34 551 11421 10910 Brachionus calyciflorus chromosome I mitochondrion, complete sequence blastn 33088 353 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;