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contig_metadata

29 rows where analysis = "blastn", bioproject = "PRJNA484127" and tax_phylum = "Nematoda"

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tax_superkingdom 1

tax_phylum 1

  • Nematoda · 29 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA484127 · 29 ✖

analysis 1

  • blastn · 29 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
448364 448364 PRJNA484127_P_NODE_14681_length_330_cov_9.155642_g14532_i0 PRJNA484127 14681 330 9.155642 30.2136186 Aonchotheca paranalis 2025203 Nematoda Nematoda 444 4.39e-120   NTclustered gi|1279640587|gb|MF621021.1| 2025203 g14532 i0 90.909 98.6212121212121 330 30 100 0 1 330 3556 3885 Aonchotheca paranalis isolate PL 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 32545 444 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Aonchotheca Aonchotheca paranalis
2999155 2999155 PRJNA484127_P_NODE_19623_length_297_cov_1.392857_g19474_i0 PRJNA484127 19623 297 1.392857 4.13678529 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 521 1.7499999999999996e-143   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g19474 i0 98.316 1 297 5 100 0 1 297 9719 10015 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 297 521 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
5552158 5552158 PRJNA484127_P_NODE_27165_length_262_cov_1.238095_g27016_i0 PRJNA484127 27165 262 1.238095 3.2438089 Trichinella spiralis 6334 Nematoda Nematoda 215 2.88e-51   NTclustered gi|339254651|ref|XM_003372501.1| 6334 g27016 i0 84.651 11.7595419847328 215 33 82 0 25 239 521 307 Trichinella spiralis hypothetical protein (Tsp_10306) mRNA, complete cds blastn 3081 215 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
5552175 5552175 PRJNA484127_P_NODE_28205_length_258_cov_1.470270_g28056_i0 PRJNA484127 28205 258 1.47027 3.7932966 Trichinella spiralis 6334 Nematoda Nematoda 230 1.0099999999999995e-55   NTclustered gi|339246888|ref|XM_003375030.1| 6334 g28056 i0 83.401 6.94573643410853 247 41 96 0 1 247 368 122 Trichinella spiralis putative LIM domain protein (Tsp_04264) mRNA, complete cds blastn 1792 230 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
8101374 8101374 PRJNA484127_P_NODE_12767_length_348_cov_4.312727_g12618_i0 PRJNA484127 12767 348 4.312727 15.00828996 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 627 4.3099999999999996e-175   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g12618 i0 99.138 33.0114942528736 348 3 100 0 1 348 739 1086 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 11488 627 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
8101569 8101569 PRJNA484127_P_NODE_23827_length_275_cov_2.915842_g23678_i0 PRJNA484127 23827 275 2.915842 8.0185655 Trichinella spiralis 6334 Nematoda Nematoda 202 2.37e-47   NTclustered gi|339250985|ref|XM_003372928.1| 6334 g23678 i0 80.072 1.00363636363636 276 51 99 4 1 274 2338 2065 Trichinella spiralis integrin beta pat-3 (Tsp_11868) mRNA, complete cds blastn 276 202 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
8101855 8101855 PRJNA484127_P_NODE_4627_length_525_cov_2.095133_g4480_i0 PRJNA484127 4627 525 2.095133 10.99944825 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 963 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g4480 i0 99.809 6.38095238095238 524 1 99 0 2 525 12204 12727 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 3350 963 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
8101902 8101902 PRJNA484127_P_NODE_747_length_1130_cov_2.047304_g668_i0 PRJNA484127 747 1130 2.047304 23.1345352 Ancylostoma caninum 29170 Nematoda Nematoda 507 2.0399999999999995e-138   NTclustered gi|86160923|gb|DQ358106.1| 29170 g668 i0 76.056 0.879646017699115 994 226 87 12 143 1130 1874 887 Ancylostoma caninum paramyosin mRNA, complete cds blastn 994 507 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Ancylostoma Ancylostoma caninum
9376174 9376174 PRJNA484127_P_NODE_1768_length_807_cov_2.385559_g1641_i0 PRJNA484127 1768 807 2.385559 19.25146113 Trichinella spiralis 6334 Nematoda Nematoda 435 6.89e-117   NTclustered gi|339247610|ref|XM_003375391.1| 6334 g1641 i0 76.572 1.05947955390335 811 178 99 10 3 807 3628 2824 Trichinella spiralis putative myosin head (Tsp_08431) mRNA, complete cds blastn 855 435 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
9376611 9376611 PRJNA484127_P_NODE_7308_length_433_cov_3.152778_g7160_i0 PRJNA484127 7308 433 3.152778 13.65152874 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 795 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g7160 i0 99.769 1.37875288683603 433 1 100 0 1 433 8394 8826 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 597 795 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
10652216 10652216 PRJNA484127_P_NODE_24749_length_271_cov_5.444444_g24600_i0 PRJNA484127 24749 271 5.444444 14.75444324 Trichinella spiralis 6334 Nematoda Nematoda 191 5.05e-44   NTclustered gi|339259677|ref|XM_003368738.1| 6334 g24600 i0 79.623 12.1771217712177 265 54 98 0 7 271 149 413 Trichinella spiralis sodium/potassium-transporting ATPase subunit alpha (Tsp_14317) mRNA, partial cds blastn 3300 191 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
10652365 10652365 PRJNA484127_P_NODE_34169_length_247_cov_1.724138_g34020_i0 PRJNA484127 34169 247 1.724138 4.25862086 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 440 4.079999999999999e-119   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g34020 i0 98.785 1 247 3 100 0 1 247 11283 11529 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 247 440 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
10652567 10652567 PRJNA484127_P_NODE_9629_length_388_cov_2.958730_g9480_i0 PRJNA484127 9629 388 2.95873 11.4798724 Trichinella spiralis 6334 Nematoda Nematoda 52.8 0.037   NTclustered gi|339233719|ref|XM_003381929.1| 6334 g9480 i0 96.774 0.0798969072164948 31 1 8 0 81 111 1153 1123 Trichinella spiralis putative leucine Rich repeat-containing domain protein (Tsp_11079) mRNA, complete cds blastn 31 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
11300504 11300504 PRJNA484127_P_NODE_1569_length_850_cov_5.232947_g1446_i0 PRJNA484127 1569 850 5.232947 44.4800495 Trichinella 6333 Nematoda Nematoda 665 0   NTclustered gi|339254855|ref|XM_003372603.1| 6334 g1446 i0 81.864 23.2258823529412 794 141 93 3 3 794 793 1 Trichinella spiralis tropomyosin (Tsp_11392) mRNA, complete cds blastn 19742 665 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
11926980 11926980 PRJNA484127_P_NODE_14330_length_333_cov_3.715385_g14181_i0 PRJNA484127 14330 333 3.715385 12.37223205 Trichinella spiralis 6334 Nematoda Nematoda 158 6.46e-34   NTclustered gi|1938390596|gb|MW302146.1| 6334 g14181 i0 90.678 33.0720720720721 118 11 35 0 1 118 6356 6239 Trichinella spiralis isolate Europe-Poland-22D20-B small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 11013 158 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
11927126 11927126 PRJNA484127_P_NODE_23810_length_275_cov_4.618812_g23661_i0 PRJNA484127 23810 275 4.618812 12.701733 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 497 2.7e-136   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g23661 i0 99.273 11.3818181818182 275 2 100 0 1 275 1143 1417 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 3130 497 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
11927289 11927289 PRJNA484127_P_NODE_330_length_1528_cov_22.514777_g281_i0 PRJNA484127 330 1528 22.514777 344.02579256 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 2765 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g281 i0 99.345 51.1446335078534 1527 10 99 0 2 1528 7174 5648 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 78149 2765 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
11927318 11927318 PRJNA484127_P_NODE_35010_length_246_cov_1.710983_g34861_i0 PRJNA484127 35010 246 1.710983 4.20901818 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 455 1.4500000000000002e-123   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g34861 i0 100 1.52032520325203 246 0 100 0 1 246 11293 11048 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 374 455 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
13202123 13202123 PRJNA484127_P_NODE_2471_length_686_cov_27.264274_g2332_i0 PRJNA484127 2471 686 27.264274 187.03291964 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1229 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g2332 i0 98.98 2.14139941690962 686 7 100 0 1 686 7237 7922 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 1469 1229 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
13202132 13202132 PRJNA484127_P_NODE_25211_length_269_cov_6.734694_g25062_i0 PRJNA484127 25211 269 6.734694 18.11632686 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 492 1.23e-134   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g25062 i0 99.628 1.25278810408922 269 1 100 0 1 269 8298 8030 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 337 492 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
14477442 14477442 PRJNA484127_P_NODE_932_length_1047_cov_4.037988_g839_i0 PRJNA484127 932 1047 4.037988 42.27773436 Capillaria sp. ALS-2019 2651741 Nematoda Nematoda 263 4.510000000000001e-65   NTclustered gi|1811126246|gb|MN526255.1| 2651741 g839 i0 74.339 19.4680038204393 756 130 84 44 1 738 221 930 Capillaria sp. ALS-2019 large subunit ribosomal RNA gene, partial sequence blastn 20383 263 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Capillaria Capillaria sp. ALS-2019
15751433 15751433 PRJNA484127_P_NODE_39513_length_237_cov_6.500000_g39364_i0 PRJNA484127 39513 237 6.5 15.405 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 422 1.41e-113   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g39364 i0 98.734 1 237 3 100 0 1 237 484 720 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 237 422 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
18299956 18299956 PRJNA484127_P_NODE_1915_length_772_cov_71.287554_g1782_i0 PRJNA484127 1915 772 71.287554 550.33991688 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1408 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g1782 i0 99.869 23.199481865285 765 1 99 0 8 772 3277 2513 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 17910 1408 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
19574547 19574547 PRJNA484127_P_NODE_40316_length_228_cov_2.716129_g40167_i0 PRJNA484127 40316 228 2.716129 6.19277412 Trichinella spiralis 6334 Nematoda Nematoda 106 1.54e-18   NTclustered gi|339234544|ref|XM_003378779.1| 6334 g40167 i0 81.89 0.557017543859649 127 21 55 2 102 227 1917 1792 Trichinella spiralis RAC-beta serine/threonine-protein kinase A (Tsp_02503) mRNA, complete cds blastn 127 106 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
20850036 20850036 PRJNA484127_P_NODE_21957_length_284_cov_2.568720_g21808_i0 PRJNA484127 21957 284 2.56872 7.2951648 Trichinella spiralis 6334 Nematoda Nematoda 270 6.65e-68   NTclustered gi|339240906|ref|XM_003376331.1| 6334 g21808 i0 86.345 5.54225352112676 249 32 87 2 35 282 1912 2159 Trichinella spiralis zinc finger protein (Tsp_00587) mRNA, complete cds blastn 1574 270 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
20850405 20850405 PRJNA484127_P_NODE_7297_length_433_cov_6.627778_g7149_i0 PRJNA484127 7297 433 6.627778 28.69827874 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 758 0   NTclustered gi|1070586637|gb|KU987805.1| 1904821 g7149 i0 99.519 87.6674364896074 416 2 96 0 18 433 1 416 Pseudocapillaria tomentosa 18S ribosomal RNA gene, partial sequence blastn 37960 758 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
22124751 22124751 PRJNA484127_P_NODE_11098_length_367_cov_2.506803_g10949_i0 PRJNA484127 11098 367 2.506803 9.19996701 Pearsonema plica 2025202 Nematoda Nematoda 243 1.9300000000000002e-59   NTclustered gi|585724675|gb|KF836607.1| 2025202 g10949 i0 92.398 20.5722070844687 171 11 46 2 99 268 1997 2166 Capillaria plica 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 7550 243 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pearsonema Pearsonema plica
24674545 24674545 PRJNA484127_P_NODE_23640_length_276_cov_2.147783_g23491_i0 PRJNA484127 23640 276 2.147783 5.92788108 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 510 3.48e-140   NTclustered gi|1070586637|gb|KU987805.1| 1904821 g23491 i0 100 98.9166666666667 276 0 100 0 1 276 587 862 Pseudocapillaria tomentosa 18S ribosomal RNA gene, partial sequence blastn 27301 510 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
24674718 24674718 PRJNA484127_P_NODE_3500_length_591_cov_5.382239_g3356_i0 PRJNA484127 3500 591 5.382239 31.80903249 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1048 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g3356 i0 98.646 5.92047377326565 591 8 100 0 1 591 4288 4878 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 3499 1048 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;