RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA484127" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA484127 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14477368 14477368 PRJNA484127_P_NODE_4912_length_512_cov_1.783599_g4765_i0 PRJNA484127 4912 512 1.783599 9.13202688 Lobosporangium transversale 64571 Fungi Fungi 60.2 3e-4   NTclustered gi|1227136130|ref|XM_022023699.1| 64571 g4765 i0 100 6.390625 32 0 6 0 171 202 289 320 Lobosporangium transversale hypothetical protein (BCR41DRAFT_350907), mRNA blastn 3272 60.2 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Lobosporangium Lobosporangium transversale
17674885 17674885 PRJNA484127_P_NODE_11474_length_363_cov_1.334483_g11325_i0 PRJNA484127 11474 363 1.334483 4.84417329 Opisthokonta 33154 Fungi Fungi 52.8 0.034   NTclustered gi|2837725994|ref|XM_069387441.1| 4840 g11325 i0 100 0.231404958677686 28 0 8 0 122 149 629 656 Rhizomucor pusillus uncharacterized protein (VTP01DRAFT_8331), partial mRNA blastn 84 52.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Rhizomucor Rhizomucor pusillus
20850127 20850127 PRJNA484127_P_NODE_27237_length_261_cov_2.484043_g27088_i0 PRJNA484127 27237 261 2.484043 6.48335223 Phycomyces blakesleeanus 4837 Fungi Fungi 213 1.03e-50   NTclustered gi|1069963891|ref|XM_018438767.1| 763407 g27088 i0 82.979 20.9463601532567 235 40 90 0 27 261 332 98 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein mRNA blastn 5467 213 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;